RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ERVK-10P10266 1014 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 PTPN2P17706 415 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 CD247P20963 164 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 SDC4P31431 198 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 MAP2K5Q13163 448 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 TMTC4Q5T4D3 741 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 OR6B2Q6IFH4 312 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 LRRC8EQ6NSJ5 796 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 TAPT1Q6NXT6 567 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 SCYL2Q6P3W7 929 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 GK5Q6ZS86 529 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 FAM183BPQ6ZVS7 135 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 KCTD8Q6ZWB6 473 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 CYP2U1Q7Z449 544 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 FEM1CQ96JP0 617 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 HGH1Q9BTY7 390 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 SLC25A23Q9BV35 468 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 MRPL4Q9BYD3 311 aaKnown RBP15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 PCDHAC1Q9H158 963 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 ABHD16BQ9H3Z7 469 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 ARMC7Q9H6L4 198 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 CYP3A43Q9HB55 503 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 GPATCH2LQ9NWQ4 482 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 NXF1Q9UBU9 619 aaKnown RBP15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 ZDHHC2Q9UIJ5 367 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 KRBA1A5PL33 1030 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ZNF839A8K0R7 811 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 DLGAP1O14490 977 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 PFDN6O15212 129 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CA12O43570 354 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TIPRLO75663 272 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 DDHD2O94830 711 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ALDH1A1P00352 501 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CKMT2P17540 419 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CAPGP40121 348 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TNFSF9P41273 254 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 EFNA5P52803 228 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 NOGQ13253 232 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 LAMC2Q13753 1193 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 SNX17Q15036 470 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 PSMD5Q16401 504 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ANO4Q32M45 955 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 MORN1Q5T089 497 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 C8orf82Q6P1X6 216 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 IGFN1Q86VF2 1251 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CBR4Q8N4T8 237 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 COLGALT1Q8NBJ5 622 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 COPS5Q92905 334 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TMEM143Q96AN5 459 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ROPN1LQ96C74 230 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TMEM176AQ96HP8 235 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 NGRNQ9NPE2 291 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 DAPK2Q9UIK4 370 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CPSF3Q9UKF6 684 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TCAF1Q9Y4C2 921 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 PRORSD1PA6NEY8 169 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 SDHDO14521 159 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CLOCKO15516 846 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 B4GALT4O60513 344 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 RASAL1O95294 804 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 OXSR1O95747 527 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 SNAI1O95863 264 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 HOXC6P09630 235 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CYP2C9P11712 490 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 HNRNPFP52597 415 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CRADDP78560 199 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TFAMQ00059 246 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 GBE1Q04446 702 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TRAF2Q12933 501 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 SPATS1Q496A3 300 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ZNF362Q5T0B9 420 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 PRMT9Q6P2P2 845 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 GALNT18Q6P9A2 607 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ZNF773Q6PK81 442 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 SPRED1Q7Z699 444 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 PCDH20Q8N6Y1 951 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 ADAM32Q8TC27 787 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 STYXQ8WUJ0 223 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 HMG20AQ9NP66 347 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 AGPAT4Q9NRZ5 378 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 CPQQ9Y646 472 aa15.39■□□□□ 0.05
CLSTN1-205ENST00000477264 MYO18AQ92614 2054 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 DOCK3Q8IZD9 2030 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 BBIP1A8MTZ0 92 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 J3QRK9 145 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 TNPO2O14787 897 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 FOXD2O60548 495 aaPredicted RBP15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 CILPO75339 1184 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 MAP3K6O95382 1288 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 IL10P22301 178 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 CSRP3P50461 194 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 ATP4BP51164 291 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 IRF9Q00978 393 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 BNIP2Q12982 314 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 CYP2A13Q16696 494 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 DGKDQ16760 1214 aa15.38■□□□□ 0.05
CLSTN1-205ENST00000477264 CCNYL2Q5T2Q4 361 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms