RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 AGAP1Q9UPQ3 857 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SHOC2Q9UQ13 582 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RUVBL1Q9Y265 456 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ATP11BQ9Y2G3 1177 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TDRKHQ9Y2W6 561 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NOSIPQ9Y314 301 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ADAM18Q9Y3Q7 739 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NEU2Q9Y3R4 380 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RAD54BQ9Y620 910 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NFS1Q9Y697 457 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TRPM3Q9HCF6 1732 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MYOM2P54296 1465 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RYR1P21817 5038 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 COL4A4P53420 1690 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ADGRL3Q9HAR2 1447 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GPATCH8Q9UKJ3 1502 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CDH23Q9H251 3354 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3DA0A087WVF3 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3IA0A087WXS9 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3EA0A087X179 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3KA0A087X1G2 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3BA6NDS4 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3FA6NER0 549 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 LRRC72A6NJI9 287 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SLC38A8A6NNN8 435 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 FADS2P1A8MWK0 482 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 KPNA7A9QM74 516 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3LB9A6J9 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 POLRMTO00411 1230 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 VWA5AO00534 786 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TERTO14746 1132 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SLC30A4O14863 429 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 DHHO43323 396 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 NUDT21O43809 227 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SSX5O60225 188 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 HS6ST1O60243 411 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PAGE4O60829 102 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 DIAPH2O60879 1101 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ZC3H11AO75152 810 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 NDUFS3O75489 264 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SPAG6O75602 509 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 EPN2O95208 641 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 STAMBPO95630 424 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PENKP01210 267 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 HMGCRP04035 888 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ZFYP08048 801 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CYP21A2P08686 494 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3HP0C7X1 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 UROSP10746 265 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 EPXP11678 715 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CD19P15391 556 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GYPEP15421 78 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PRLRP16471 622 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GPTP24298 496 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PCSK1P29120 753 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 LRPAP1P30533 357 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CTNNB1P35222 781 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SKIV2L2P42285 1042 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 EPS15P42566 896 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 KIR2DL1P43626 348 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 KIR2DL2P43627 348 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GSTM5P46439 218 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PITPNBP48739 271 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CAMLGP49069 296 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 DIO1P49895 249 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PMS2P54278 862 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PNLIPRP2P54317 469 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 HAND2P61296 217 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ST8SIA6P61647 398 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 MECOMQ03112 1051 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PTH1RQ03431 593 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SRSF11Q05519 484 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ELP6Q0PNE2 266 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GRSF1Q12849 480 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SCGB2A2Q13296 93 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CDK5R2Q13319 367 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GRAPQ13588 217 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ZRSR1Q15695 479 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 STK11Q15831 433 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 LETM2Q2VYF4 491 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GAB4Q2WGN9 574 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 P3H1Q32P28 736 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CYP27C1Q4G0S4 372 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 RUNDC3AQ59EK9 446 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 MFSD14BQ5SR56 506 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC122Q5T0U0 273 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TRAPPC3LQ5T215 181 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ATAD3BQ5T9A4 648 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 RIPPLY2Q5TAB7 128 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CD276Q5ZPR3 534 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3GQ6DHY5 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3CQ6IPX1 549 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CDPF1Q6NVV7 123 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ARHGAP11AQ6P4F7 1023 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CTR9Q6PD62 1173 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SEZ6L2Q6UXD5 910 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ZYG11AQ6WRX3 759 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SLC36A4Q6YBV0 504 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GLDNQ6ZMI3 551 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SLCO4C1Q6ZQN7 724 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms