RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ATG16L1Q676U5 607 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 TXNDC8Q6A555 127 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 MFSD6LQ8IWD5 586 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 ARHGAP18Q8N392 663 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CCNYL1Q8N7R7 359 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 PAWRQ96IZ0 340 aaKnown RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 TSGA13Q96PP4 275 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 MMADHCQ9H3L0 296 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RAD54BQ9Y620 910 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 PITPNM1O00562 1244 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-221ENST00000477203 CPA3P15088 417 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 ARNTP27540 789 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 MAGEA11P43364 429 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 RGRP47804 291 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.24
HDAC7-221ENST00000477203 TWF1Q12792 350 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 PEX6Q13608 980 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 PCID2Q5JVF3 399 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 TIGD7Q6NT04 549 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-221ENST00000477203 NAPRTQ6XQN6 538 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 LINC00523Q86TU6 105 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-221ENST00000477203 FBXO27Q8NI29 283 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 SH3RF2Q8TEC5 729 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.24
HDAC7-221ENST00000477203 ERI2A8K979 691 aaKnown RBP13.52□□□□□ -0.25
HDAC7-221ENST00000477203 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.52□□□□□ -0.25
HDAC7-221ENST00000477203 H7C4K7 107 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 PEX11BO96011 259 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 RALBP11234 206 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 MUM1Q2TAK8 710 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 ANO4Q32M45 955 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 HOMEZQ8IX15 550 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 HDAC10Q969S8 669 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 IFT43Q96FT9 208 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 MRPL9Q9BYD2 267 aaKnown RBP13.52□□□□□ -0.25
HDAC7-221ENST00000477203 SMG9Q9H0W8 520 aaKnown RBP13.52□□□□□ -0.25
HDAC7-221ENST00000477203 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
HDAC7-221ENST00000477203 LNPEPQ9UIQ6 1025 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 DNMT3LQ9UJW3 386 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 TCAF1Q9Y4C2 921 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 CHD9Q3L8U1 2897 aa13.52□□□□□ -0.25
HDAC7-221ENST00000477203 PATJQ8NI35 1801 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 MEI4A8MW99 385 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 SNAP91O60641 907 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 PROCP04070 461 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 CHRNGP07510 517 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 ALDH1A3P47895 512 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 SERPINB8P50452 374 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 SEMG2Q02383 582 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 DBN1Q16643 649 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 ZC3HC1Q86WB0 502 aaKnown RBP13.51□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF683Q8IZ20 524 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 SCML4Q8N228 414 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 EFHBQ8N7U6 833 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 NXNL1Q96CM4 212 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 RMDN1Q96DB5 314 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 MUC3BQ9H195 1237 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
HDAC7-221ENST00000477203 SIRPGQ9P1W8 387 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 COPG2Q9UBF2 871 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 A8MX80 341 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 MBL2P11226 248 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-221ENST00000477203 TSPAN8P19075 237 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 CSHL1Q14406 222 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 FBXO48Q5FWF7 155 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 HECTD3Q5T447 861 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 CARNMT1Q8N4J0 409 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-221ENST00000477203 GBP7Q8N8V2 638 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-221ENST00000477203 OR13C4Q8NGS5 318 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 CWH43Q9H720 699 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
HDAC7-221ENST00000477203 PCDHGC4Q9Y5F7 938 aa13.51□□□□□ -0.25
HDAC7-221ENST00000477203 FAM95CA0A1B0GW59 222 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 ETS2P15036 469 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 NCF2P19878 526 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-221ENST00000477203 HOXC13P31276 330 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 SERPINH1P50454 418 aaKnown RBP13.5□□□□□ -0.25
HDAC7-221ENST00000477203 TAS2R39P59534 338 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 PRAMEP78395 509 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 OCRLQ01968 901 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 KLC1Q07866 573 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
HDAC7-221ENST00000477203 LBRQ14739 615 aaKnown RBP13.5□□□□□ -0.25
HDAC7-221ENST00000477203 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 RANBP10Q6VN20 620 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 UMODL1-AS1Q8N2C9 162 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 UTP4Q969X6 686 aaKnown RBP13.5□□□□□ -0.25
HDAC7-221ENST00000477203 TBATAQ96M53 351 aa13.5□□□□□ -0.25
HDAC7-221ENST00000477203 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms