RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 SEMA4GQ9NTN9 838 aa18■□□□□ 0.47
SMIM4-202ENST00000476842 HAUS2Q9NVX0 235 aa18■□□□□ 0.47
SMIM4-202ENST00000476842 FADS3Q9Y5Q0 445 aa18■□□□□ 0.47
SMIM4-202ENST00000476842 TSPAN11A1L157 253 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 TTC24A2A3L6 582 aaPredicted RBP17.99■□□□□ 0.47
SMIM4-202ENST00000476842 GJB3O75712 270 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 TJP3O95049 919 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 PIGNO95427 931 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 JCHAINP01591 159 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 TIMP2P16035 220 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 SERPINA4P29622 427 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
SMIM4-202ENST00000476842 SUOXP51687 545 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 MAXP61244 160 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 IFI35P80217 286 aaPredicted RBP17.99■□□□□ 0.47
SMIM4-202ENST00000476842 ALG1LQ6GMV1 187 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 AADACL2Q6P093 401 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 RABEPKQ7Z6M1 372 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 C1orf216Q8TAB5 229 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 POLR1EQ9GZS1 481 aaKnown RBP17.99■□□□□ 0.47
SMIM4-202ENST00000476842 NOD2Q9HC29 1040 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 SCUBE2Q9NQ36 999 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 EIF2B4Q9UI10 523 aaKnown RBP17.99■□□□□ 0.47
SMIM4-202ENST00000476842 ATP8A1Q9Y2Q0 1164 aa17.99■□□□□ 0.47
SMIM4-202ENST00000476842 NYNRINQ9P2P1 1898 aaKnown RBP17.99■□□□□ 0.47
SMIM4-202ENST00000476842 OTOGLQ3ZCN5 2332 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 HACD1B0YJ81 288 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 KCNK1O00180 336 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 TRAFD1O14545 582 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-202ENST00000476842 LATO43561 262 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 FOXD2O60548 495 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-202ENST00000476842 NEBLO76041 1014 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 GNSP15586 552 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 CD27P26842 260 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 ITKQ08881 620 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 CCDC173Q0VFZ6 552 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 ZNF211Q13398 564 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-202ENST00000476842 XRCC4Q13426 336 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 PRKD1Q15139 912 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-202ENST00000476842 RPS6KA1Q15418 735 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 CCDC6Q16204 474 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 DUOXA1Q1HG43 343 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 CCDC181Q5TID7 509 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 BRAT1Q6PJG6 821 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 TRIM69Q86WT6 500 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 TFB1MQ8WVM0 346 aaKnown RBP17.98■□□□□ 0.47
SMIM4-202ENST00000476842 SPOCK2Q92563 424 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 ECHDC3Q96DC8 303 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 FEM1CQ96JP0 617 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 ORAI3Q9BRQ5 295 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 SUSD2Q9UGT4 822 aa17.98■□□□□ 0.47
SMIM4-202ENST00000476842 A0A1W2PPC4 97 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 AREL1O15033 823 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
SMIM4-202ENST00000476842 TSPAN6O43657 245 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 RNGTTO60942 597 aaKnown RBP17.97■□□□□ 0.47
SMIM4-202ENST00000476842 PCDH8O95206 1070 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 NUDT1P36639 197 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 ABL2P42684 1182 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 PPP2CBP62714 309 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 POLR2LP62875 67 aaKnown RBP17.97■□□□□ 0.47
SMIM4-202ENST00000476842 PPP2CAP67775 309 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 ZBTB17Q13105 803 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 UGP2Q16851 508 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 SLC23A3Q6PIS1 610 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 PRPF39Q86UA1 669 aaKnown RBP17.97■□□□□ 0.47
SMIM4-202ENST00000476842 ZC3H18Q86VM9 953 aaKnown RBP17.97■□□□□ 0.47
SMIM4-202ENST00000476842 HORMAD1Q86X24 394 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 CNTD1Q8N815 330 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 ARRDC2Q8TBH0 407 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 SNX19Q92543 992 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 HAUS1Q96CS2 278 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 SEMA3CQ99985 751 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 MIR1-1HGQ9H1L0 117 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 SMOC1Q9H4F8 434 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 EBF2Q9HAK2 575 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 PCDHGC4Q9Y5F7 938 aa17.97■□□□□ 0.47
SMIM4-202ENST00000476842 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
SMIM4-202ENST00000476842 A0A1B0GTW7 788 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 A0A1W2PQU0 124 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 PRR5-ARHGAP8B1AHC4 643 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 KHNYNO15037 678 aaKnown RBP17.96■□□□□ 0.47
SMIM4-202ENST00000476842 MTSS1O43312 755 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 SOCS5O75159 536 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 HLA-DQB2P05538 268 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 SERPINF2P08697 491 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 NOMO1Q15155 1222 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 TEX44Q53QW1 395 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 CFAP58Q5T655 872 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 B4GALNT4Q76KP1 1039 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 ZSCAN30Q86W11 494 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 ZSWIM9Q86XI8 627 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 SLC6A14Q9UN76 642 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 ZFR2Q9UPR6 939 aaKnown RBP17.96■□□□□ 0.47
SMIM4-202ENST00000476842 FRYLO94915 3013 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 SDK1Q7Z5N4 2213 aa17.96■□□□□ 0.47
SMIM4-202ENST00000476842 THADAQ6YHU6 1953 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 PIEZO1Q92508 2521 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms