RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 A0A1W2PQC6 194 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 C9orf172C9J069 976 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 AGRPO00253 132 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 TOR1BO14657 336 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 AREL1O15033 823 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 ALPIP09923 528 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-213ENST00000476777 BLKP51451 505 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 HK3P52790 923 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 KRT85P78386 507 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 FOXK1P85037 733 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 TCEA2Q15560 299 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 SKIDA1Q1XH10 827 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 CCDC40Q4G0X9 1142 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 BRMS1LQ5PSV4 323 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 LRRC31Q6UY01 552 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 C11orf57Q6ZUT1 292 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-213ENST00000476777 SLC26A9Q7LBE3 791 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 PTRH1Q86Y79 214 aaKnown RBP11.53□□□□□ -0.56
BRCA1-213ENST00000476777 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 OR6K2Q8NGY2 324 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 USP7Q93009 1102 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 TMEM159Q96B96 161 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 C1orf74Q96LT6 269 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 NPY6RQ99463 290 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 TM6SF2Q9BZW4 377 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 INTS2Q9H0H0 1204 aaKnown RBP11.53□□□□□ -0.56
BRCA1-213ENST00000476777 ATP13A1Q9HD20 1204 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 UBE2TQ9NPD8 197 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-213ENST00000476777 TMPRSS4Q9NRS4 437 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 GPR34Q9UPC5 381 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 PCDHB11Q9Y5F2 797 aa11.53□□□□□ -0.56
BRCA1-213ENST00000476777 CHD5Q8TDI0 1954 aa11.52□□□□□ -0.56
BRCA1-213ENST00000476777 ABCA12Q86UK0 2595 aa11.52□□□□□ -0.56
BRCA1-213ENST00000476777 SPENQ96T58 3664 aaKnown RBP11.52□□□□□ -0.56
BRCA1-213ENST00000476777 MMP20O60882 483 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 ERBB2P04626 1255 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 CD82P27701 267 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 SLC6A3Q01959 620 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 IGFBP7Q16270 282 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 ALG11Q2TAA5 492 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 CCNJLQ8IV13 435 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 HID1Q8IV36 788 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 Q8N9G6 341 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-213ENST00000476777 TP53I13Q8NBR0 393 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-213ENST00000476777 ZNF397Q8NF99 534 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-213ENST00000476777 GPR156Q8NFN8 814 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 OR6C4Q8NGE1 309 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 NT5C3BQ969T7 300 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 TSACCQ96A04 125 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-213ENST00000476777 ISG20Q96AZ6 181 aaKnown RBP11.52□□□□□ -0.57
BRCA1-213ENST00000476777 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 EPAS1Q99814 870 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 SLC12A9Q9BXP2 914 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 MAN2B2Q9Y2E5 1009 aa11.52□□□□□ -0.57
BRCA1-213ENST00000476777 ANKRD17O75179 2603 aaKnown RBP11.52□□□□□ -0.57
BRCA1-213ENST00000476777 CRYBG3Q68DQ2 2970 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 BECN2A8MW95 431 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-213ENST00000476777 SRGAP2O75044 1071 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 TM7SF2O76062 418 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 UGT2B4P06133 528 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
BRCA1-213ENST00000476777 CTSEP14091 401 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 PEX5P50542 639 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 MAPK10P53779 464 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 GNA12Q03113 381 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 SERINC3Q13530 473 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 IRF4Q15306 451 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 LRRC73Q5JTD7 316 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 TMPRSS9Q7Z410 1059 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 GKN2Q86XP6 184 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 PASD1Q8IV76 773 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 SLITRK4Q8IW52 837 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 RYBPQ8N488 228 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-213ENST00000476777 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
BRCA1-213ENST00000476777 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 PGAP3Q96FM1 320 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-213ENST00000476777 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 KLHL32Q96NJ5 620 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 PSMG3-AS1Q96PY0 264 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 CMKLR1Q99788 373 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 C1QTNF7Q9BXJ2 289 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 B3GNT4Q9C0J1 378 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 RRN3Q9NYV6 651 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 RNF215Q9Y6U7 377 aa11.51□□□□□ -0.57
BRCA1-213ENST00000476777 LRP4O75096 1905 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 CELSR2Q9HCU4 2923 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 CXorf51AA0A1B0GTR3 108 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 TMEM110-MUSTN1A8MSY1 372 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 KRIT1O00522 736 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 PSMA7O14818 248 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 RASGRP1O95267 797 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms