RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PTAR1Q7Z6K3 402 aaPredicted RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PSTKQ8IV42 348 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 ARHGAP12Q8IWW6 846 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 SYN2Q92777 582 aaPredicted RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ZNF653Q96CK0 615 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 CELF6Q96J87 481 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 NCAPGQ9BPX3 1015 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 SNRNP25Q9BV90 132 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 SUV39H2Q9H5I1 410 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 CAAP1Q9H8G2 361 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 MRPL47Q9HD33 250 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 LHX3Q9UBR4 397 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ITM2BQ9Y287 266 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 BZW2Q9Y6E2 419 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 SCINQ9Y6U3 715 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 DOCK4Q8N1I0 1966 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 KNTC1P50748 2209 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 NEMP2A6NFY4 417 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 ARHGAP42A6NI28 874 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 SCAMP1O15126 338 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 BUB1BO60566 1050 aaPredicted RBP10.92□□□□□ -0.66
SEC13-214ENST00000476597 MMP20O60882 483 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 LRCH4O75427 683 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 CSF2P04141 144 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 PCK1P35558 622 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 CSNK1DP48730 415 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 UBASH3AP57075 661 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 HNRNPKP61978 463 aaKnown RBP eCLIP10.92□□□□□ -0.66
SEC13-214ENST00000476597 TPM4P67936 248 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 CYP4F3Q08477 520 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 GRM3Q14832 879 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 TMEM52BQ4KMG9 183 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 ZNF542PQ5EBM4 170 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 TPRG1LQ5T0D9 272 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 CACTIN-AS1Q8N1I8 211 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 OR4C6Q8NH72 309 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 TRIM11Q96F44 468 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 CWC15Q9P013 229 aaKnown RBP10.92□□□□□ -0.66
SEC13-214ENST00000476597 MYO1AQ9UBC5 1043 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
SEC13-214ENST00000476597 KLF15Q9UIH9 416 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 CAPN11Q9UMQ6 739 aa10.92□□□□□ -0.66
SEC13-214ENST00000476597 ACACAQ13085 2346 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 GOLGA4Q13439 2230 aaKnown RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 TSPAN11A1L157 253 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 TM7SF2O76062 418 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 PIGNO95427 931 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 NME1P15531 152 aaKnown RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 IL1R2P27930 398 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 CLDN6P56747 220 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 YPEL5P62699 121 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 ZBED6P86452 979 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 E2F1Q01094 437 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 NSUN2Q08J23 767 aaKnown RBP eCLIP10.91□□□□□ -0.66
SEC13-214ENST00000476597 EIF2B5Q13144 721 aaKnown RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 TARDBPQ13148 414 aaKnown RBP eCLIP10.91□□□□□ -0.66
SEC13-214ENST00000476597 PDE1CQ14123 709 aaPredicted RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 UGP2Q16851 508 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 BOLA3Q53S33 107 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 HS1BP3Q53T59 392 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 PPP6R3Q5H9R7 873 aaPredicted RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 LRRC73Q5JTD7 316 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 SRLQ86TD4 932 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 PARGQ86W56 976 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 LZTR1Q8N653 840 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 FAM181AQ8N9Y4 354 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 CXorf40AQ8TE69 158 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 RFFLQ8WZ73 363 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 IQCDQ96DY2 449 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 EXOC2Q96KP1 924 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 ZNF641Q96N77 438 aaPredicted RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 MBNL1Q9NR56 388 aaKnown RBP10.91□□□□□ -0.66
SEC13-214ENST00000476597 DNAJC28Q9NX36 388 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 NLGN3Q9NZ94 848 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 CSNK1G3Q9Y6M4 447 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 TMEM131Q92545 1883 aa10.91□□□□□ -0.66
SEC13-214ENST00000476597 ARID1BQ8NFD5 2236 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 K7ESM1 405 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 TOR1BO14657 336 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 FFAR2O15552 330 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 PALMO75781 387 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 SERPING1P05155 500 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 ALPPL2P10696 532 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 CKMT1AP12532 417 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 TCF4P15884 667 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 XPAP23025 273 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 HNF1BP35680 557 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 RGRP47804 291 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 DAB2P98082 770 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 IL10RBQ08334 325 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 ELP6Q0PNE2 266 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 DPYSQ14117 519 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 PTK2BQ14289 1009 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 PIGHQ14442 188 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 RFTN1Q14699 578 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 DPYSL2Q16555 572 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms