RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 RPS10-NUDT3A0A1W2PQS6 291 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 LDLRAD4O15165 306 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 NTN1O95631 604 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 UBL4AP11441 157 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 PCNAP12004 261 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 ARSBP15848 533 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 DCTDP32321 178 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 RYKP34925 604 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 P2RX3P56373 397 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 DENND6AQ8IWF6 608 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 CNTROBQ8N137 903 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 TEX45Q8NA69 505 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 METTL6Q8TCB7 284 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 KCNG4Q8TDN1 519 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 HDAC2Q92769 488 aaKnown RBP5.18□□□□□ -1.58
PTCD3-211ENST00000476215 NR1H4Q96RI1 486 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-211ENST00000476215 CARD8Q9Y2G2 431 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 TTC3P53804 2025 aa5.18□□□□□ -1.58
PTCD3-211ENST00000476215 CCDC180Q9P1Z9 1646 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 HSPB2A8KAH6 182 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 KLRF2D3W0D1 207 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 I6L893 689 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 CRYABP02511 175 aaKnown RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 HEXAP06865 529 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 HOXB2P14652 356 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 SRD5A1P18405 259 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 SCP2P22307 547 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 CLDN2P57739 230 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 ZP1P60852 638 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 LPIN1Q14693 890 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 PPP2R5BQ15173 497 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 HSPB2Q16082 182 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 LEXMQ3ZCV2 418 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 PRAMEF19Q5SWL8 479 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 FAM180BQ6P0A1 224 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 DSTYKQ6XUX3 929 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 DIS3L2Q8IYB7 885 aaKnown RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 GJC3Q8NFK1 279 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 TDRD7Q8NHU6 1098 aaKnown RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 SKA1Q96BD8 255 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 C7orf26Q96N11 449 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 BBS4Q96RK4 519 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 UBA5Q9GZZ9 404 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 MAF1Q9H063 256 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 RBM38Q9H0Z9 239 aaKnown RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 PLAC1Q9HBJ0 212 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 OLA1Q9NTK5 396 aaKnown RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 AASSQ9UDR5 926 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 NDRG3Q9UGV2 375 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 SRPRBQ9Y5M8 271 aaKnown RBP5.17□□□□□ -1.58
PTCD3-211ENST00000476215 KDM3AQ9Y4C1 1321 aa5.17□□□□□ -1.58
PTCD3-211ENST00000476215 A0A1W2PQM1 296 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 BECN2A8MW95 431 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 KDM4EB2RXH2 506 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 MS4A18H0YCH9 400 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CHL1O00533 1208 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 LDB2O43679 373 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 LIASO43766 372 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CBSLP0DN79 551 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 IRF1P10914 325 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 MAN1A1P33908 653 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CBSP35520 551 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 THPOP40225 353 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CXCR3P49682 368 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 EIF3BP55884 814 aaKnown RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 HDAC4P56524 1084 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 FAM27E3Q08E93 113 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 TRAF1Q13077 416 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 DCTN2Q13561 401 aaKnown RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 ARHGEF6Q15052 776 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 HIST2H2ACQ16777 129 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 ZNF260Q3ZCT1 412 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 OTUD1Q5VV17 481 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 LRRC8EQ6NSJ5 796 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CPLX2Q6PUV4 134 aaKnown RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 Q6ZSV7 163 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 ZNF367Q7RTV3 350 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 SLC46A3Q7Z3Q1 461 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CPLX4Q7Z7G2 160 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 CADM4Q8NFZ8 388 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 TMEM163Q8TC26 289 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 GPT2Q8TD30 523 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 URB1-AS1Q96HZ7 61 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 SIN3AQ96ST3 1273 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 H2AFJQ9BTM1 129 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 ANKRD10Q9NXR5 420 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 ORC3Q9UBD5 711 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-211ENST00000476215 A4GNTQ9UNA3 340 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 FAM96BQ9Y3D0 163 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 INSL5Q9Y5Q6 135 aa5.16□□□□□ -1.58
PTCD3-211ENST00000476215 TTC36A6NLP5 189 aa5.15□□□□□ -1.59
PTCD3-211ENST00000476215 SNAP23O00161 211 aa5.15□□□□□ -1.59
PTCD3-211ENST00000476215 TMEM63AO94886 807 aa5.15□□□□□ -1.59
PTCD3-211ENST00000476215 CPOXP36551 454 aa5.15□□□□□ -1.59
PTCD3-211ENST00000476215 GNAQP50148 359 aa5.15□□□□□ -1.59
PTCD3-211ENST00000476215 PMS2P54278 862 aa5.15□□□□□ -1.59
PTCD3-211ENST00000476215 GEMIN4P57678 1058 aaKnown RBP5.15□□□□□ -1.59
PTCD3-211ENST00000476215 RNPS1Q15287 305 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms