RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CYSRT1A8MQ03 144 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 CSO75390 466 aaKnown RBP10.63□□□□□ -0.71
CALD1-217ENST00000475772 CSF2P04141 144 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 PRNPP04156 253 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 GP1BAP07359 652 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 L1CAMP32004 1257 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 GABRB2P47870 512 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 RNASE9P60153 205 aaKnown RBP10.63□□□□□ -0.71
CALD1-217ENST00000475772 GABREP78334 506 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 CFHR1Q03591 330 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 EIF2B5Q13144 721 aaKnown RBP10.63□□□□□ -0.71
CALD1-217ENST00000475772 ISXQ2M1V0 245 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 RAB6CQ53S08 254 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 BRMS1LQ5PSV4 323 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 ARHGAP40Q5TG30 622 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 C22orf39Q6P5X5 142 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 TFAP2DQ7Z6R9 452 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 GRIN3AQ8TCU5 1115 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 TTC9Q92623 222 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 LGMNQ99538 433 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 MAGEB5Q9BZ81 275 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 RAB6CQ9H0N0 254 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 POLR1BQ9H9Y6 1135 aa10.63□□□□□ -0.71
CALD1-217ENST00000475772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
CALD1-217ENST00000475772 HOOK1Q9UJC3 728 aaKnown RBP10.63□□□□□ -0.71
CALD1-217ENST00000475772 ARHGEF17Q96PE2 2063 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 FAM170AA1A519 330 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 ILVBLA1L0T0 632 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 PMS2P1A4D2B8 440 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 EME2A4GXA9 379 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 A6NNZ2 444 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 ADRB3P13945 408 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 NME1P15531 152 aaKnown RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 GKP32189 559 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 CDH5P33151 784 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 FLT3P36888 993 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 SULT1E1P49888 294 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 PCBP4P57723 403 aaKnown RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 ERVPABLB-1P60509 514 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 HNRNPKP61978 463 aaKnown RBP eCLIP10.62□□□□□ -0.71
CALD1-217ENST00000475772 DEUP1Q05D60 604 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 MTA1Q13330 715 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 DRAP1Q14919 205 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 EXOC3L4Q17RC7 722 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 C2CD6Q53TS8 623 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 CARD16Q5EG05 197 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 PERM1Q5SV97 790 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 SAMD5Q5TGI4 173 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 GUSBP11Q6P575 273 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 KYAT3Q6YP21 454 aaKnown RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 GBP6Q6ZN66 633 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 XYLT1Q86Y38 959 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 DCP2Q8IU60 420 aaKnown RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 LSMEM2Q8N112 164 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 ZNF548Q8NEK5 533 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 IFI44Q8TCB0 444 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 SNRNP27Q8WVK2 155 aaKnown RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 ABHD17AQ96GS6 310 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 FEM1CQ96JP0 617 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 FAM81BQ96LP2 452 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 LENG8Q96PV6 779 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 DEPDC7Q96QD5 511 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 HEPHQ9BQS7 1158 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 TCEAL2Q9H3H9 227 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 RRN3Q9NYV6 651 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 GGT7Q9UJ14 662 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 TMEM59LQ9UK28 342 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 DNAJC12Q9UKB3 198 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 ATXN7L1Q9ULK2 861 aaPredicted RBP10.62□□□□□ -0.71
CALD1-217ENST00000475772 ENTPD2Q9Y5L3 495 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
CALD1-217ENST00000475772 SCN8AQ9UQD0 1980 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 GTPBP10A4D1E9 387 aaKnown RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 NEMP2A6NFY4 417 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 IGLON5A6NGN9 336 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 AP1G1O43747 822 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 SRGAP2O75044 1071 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 GCATO75600 419 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 ITGB7P26010 798 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 OR1E1P30953 314 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 KRT9P35527 623 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 ACVRL1P37023 503 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 SERPINH1P50454 418 aaKnown RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 CCNHP51946 323 aaPredicted RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 NEK3P51956 506 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 PFN3P60673 137 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 RPS21P63220 83 aaKnown RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 SRSF11Q05519 484 aaKnown RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 CCDC15Q0P6D6 951 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 CDKN3Q16667 212 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 SLC25A52Q3SY17 297 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 IGF2-ASQ6U949 168 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 PARS2Q7L3T8 475 aaKnown RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 PTAR1Q7Z6K3 402 aaPredicted RBP10.61□□□□□ -0.71
CALD1-217ENST00000475772 CREBRFQ8IUR6 639 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 FAM71AQ8IYT1 594 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 COL26A1Q96A83 441 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 WBP1Q96G27 269 aa10.61□□□□□ -0.71
CALD1-217ENST00000475772 ATXN7L3BQ96GX2 97 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms