RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ZNF677Q86XU0 584 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 FAM174AQ8TBP5 190 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 EPS8L1Q8TE68 723 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 NKD1Q969G9 470 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 CCDC74AQ96AQ1 378 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 CPXM1Q96SM3 734 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 CPEB1Q9BZB8 566 aaKnown RBP14.32□□□□□ -0.12
ATG9A-220ENST00000475339 SPASTQ9UBP0 616 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 GULP1Q9UBP9 304 aa14.32□□□□□ -0.12
ATG9A-220ENST00000475339 LMO7DNF2Z398 122 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 YY2O15391 372 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 GABBR2O75899 941 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 LSM8O95777 96 aaKnown RBP14.31□□□□□ -0.12
ATG9A-220ENST00000475339 CLDN1O95832 211 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 IGLV3-27P01718 113 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 TPM3P06753 285 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 CCDC172P0C7W6 258 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 LIFP15018 202 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 RPL34P49207 117 aaKnown RBP14.31□□□□□ -0.12
ATG9A-220ENST00000475339 FANCCQ00597 558 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 CDR2Q01850 454 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 PDE1CQ14123 709 aaPredicted RBP14.31□□□□□ -0.12
ATG9A-220ENST00000475339 ACCSLQ4AC99 568 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 C1QL3Q5VWW1 255 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 NUGGCQ68CJ6 796 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 ESRP1Q6NXG1 681 aaKnown RBP14.31□□□□□ -0.12
ATG9A-220ENST00000475339 TMEM110Q86TL2 294 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 UNC45BQ8IWX7 931 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 CATSPER2Q96P56 530 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 NUCKS1Q9H1E3 243 aaKnown RBP14.31□□□□□ -0.12
ATG9A-220ENST00000475339 CUEDC1Q9NWM3 386 aaPredicted RBP14.31□□□□□ -0.12
ATG9A-220ENST00000475339 SDK2Q58EX2 2172 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 HIVEP3Q5T1R4 2406 aa14.31□□□□□ -0.12
ATG9A-220ENST00000475339 STMND1H3BQB6 276 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 MCF2LO15068 1137 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 NKX2-8O15522 239 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 BNIP3LO60238 219 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 PAK4O96013 591 aaPredicted RBP14.3□□□□□ -0.12
ATG9A-220ENST00000475339 ANXA6P08133 673 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 MMEP08473 750 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 NR1D1P20393 614 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 RABIFP47224 123 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 ATP1A2P50993 1020 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 UBASH3AP57075 661 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 ZFP36L1Q07352 338 aaKnown RBP14.3□□□□□ -0.12
ATG9A-220ENST00000475339 FGL2Q14314 439 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 KRTAP21-3Q3LHN1 58 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 TMEM259Q4ZIN3 620 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 DCAF6Q58WW2 860 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 MS4A13Q5J8X5 152 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 MSANTD2Q6P1R3 559 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 TRIM72Q6ZMU5 477 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 HEATR4Q86WZ0 1026 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 WDTC1Q8N5D0 677 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 IL22RA1Q8N6P7 574 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 TMEM159Q96B96 161 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 NAP1L5Q96NT1 182 aaPredicted RBP14.3□□□□□ -0.12
ATG9A-220ENST00000475339 SERPINB11Q96P15 392 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 CMKLR1Q99788 373 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 LRRC61Q9BV99 259 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 LRRN3Q9H3W5 708 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 POPDC2Q9HBU9 364 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 SEPT11Q9NVA2 429 aaKnown RBP14.3□□□□□ -0.12
ATG9A-220ENST00000475339 SIRPGQ9P1W8 387 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 APOBEC3BQ9UH17 382 aaKnown RBP14.3□□□□□ -0.12
ATG9A-220ENST00000475339 NOCTQ9UK39 431 aaKnown RBP14.3□□□□□ -0.12
ATG9A-220ENST00000475339 TRPM6Q9BX84 2022 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 MTORP42345 2549 aa14.3□□□□□ -0.12
ATG9A-220ENST00000475339 FAM170AA1A519 330 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 WIPF3A6NGB9 483 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 HSF2BPO75031 334 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 FERP16591 822 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 YWHAZP63104 245 aaKnown RBP14.29□□□□□ -0.12
ATG9A-220ENST00000475339 PTPN20Q4JDL3 420 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 EFHC1Q5JVL4 640 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 NAA35Q5VZE5 725 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 FAM183BPQ6ZVS7 135 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 Q6ZVU0 165 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 TMPRSS9Q7Z410 1059 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 ZDHHC17Q8IUH5 632 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 TEX19Q8NA77 164 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 KYQ8NBH2 561 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 GALNT11Q8NCW6 608 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 DQX1Q8TE96 717 aaKnown RBP14.29□□□□□ -0.12
ATG9A-220ENST00000475339 AZIN2Q96A70 460 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 SLC17A9Q9BYT1 436 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 CLPBQ9H078 707 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 FAM204AQ9H8W3 233 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 ASNSD1Q9NWL6 643 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 PNMA8BQ9ULN7 279 aaPredicted RBP14.29□□□□□ -0.12
ATG9A-220ENST00000475339 TP53TG5Q9Y2B4 290 aa14.29□□□□□ -0.12
ATG9A-220ENST00000475339 ADGRG4Q8IZF6 3080 aa14.28□□□□□ -0.12
ATG9A-220ENST00000475339 ZNF891A8MT65 544 aaPredicted RBP14.28□□□□□ -0.12
ATG9A-220ENST00000475339 K7EM74 188 aa14.28□□□□□ -0.12
ATG9A-220ENST00000475339 RNF103O00237 685 aa14.28□□□□□ -0.12
ATG9A-220ENST00000475339 KPNA3O00505 521 aaPredicted RBP14.28□□□□□ -0.12
ATG9A-220ENST00000475339 ERBB2P04626 1255 aa14.28□□□□□ -0.12
ATG9A-220ENST00000475339 CTSLP07711 333 aa14.28□□□□□ -0.12
ATG9A-220ENST00000475339 GLI1P08151 1106 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms