RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ASTE1Q2TB18 679 aaPredicted RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 ZNF805Q5CZA5 627 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 Q6ZSR6 202 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 DCP2Q8IU60 420 aaKnown RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 SPC24Q8NBT2 197 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 RAB7BQ96AH8 199 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 DCBLD2Q96PD2 775 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 SNRNP25Q9BV90 132 aaKnown RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 C1QTNF7Q9BXJ2 289 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 ZWILCHQ9H900 591 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 LUC7LQ9NQ29 371 aaKnown RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 NDFIP2Q9NV92 336 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 UVRAGQ9P2Y5 699 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 ZFR2Q9UPR6 939 aaKnown RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 FADS3Q9Y5Q0 445 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 ACTL7AQ9Y615 435 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 DMXL2Q8TDJ6 3036 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 ANKRD11Q6UB99 2663 aaPredicted RBP15.33■□□□□ 0.05
VARS-223ENST00000474643 CXorf51AA0A1B0GTR3 108 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 TMEM110-MUSTN1A8MSY1 372 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 EEF2KO00418 725 aaKnown RBP15.33■□□□□ 0.04
VARS-223ENST00000474643 SIGLEC6O43699 453 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 KDELR3O43731 214 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 AP1G1O43747 822 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 TMCC1O94876 653 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 IPO7O95373 1038 aaKnown RBP15.33■□□□□ 0.04
VARS-223ENST00000474643 TMEM253P0C7T8 217 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 FECHP22830 423 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 DGKAP23743 735 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 GKP32189 559 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 PCK1P35558 622 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 THOP1P52888 689 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 SPA17Q15506 151 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 HADHQ16836 314 aaKnown RBP15.33■□□□□ 0.04
VARS-223ENST00000474643 PARP15Q460N3 678 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 ZFYVE27Q5T4F4 411 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 ATXN7L2Q5T6C5 722 aaPredicted RBP15.33■□□□□ 0.04
VARS-223ENST00000474643 MANEALQ5VSG8 457 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 GDPD4Q6W3E5 623 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 TTC7BQ86TV6 843 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 NLRP14Q86W24 1093 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 CXorf40AQ8TE69 158 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 HNRNPLLQ8WVV9 542 aaKnown RBP15.33■□□□□ 0.04
VARS-223ENST00000474643 CASKIN2Q8WXE0 1202 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 HSPH1Q92598 858 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 KLHL32Q96NJ5 620 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 PEBP4Q96S96 227 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 ZNF212Q9UDV6 495 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 NENFQ9UMX5 172 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 PTPRBP23467 1997 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 PKD1L2Q7Z442 2459 aa15.33■□□□□ 0.04
VARS-223ENST00000474643 IGLON5A6NGN9 336 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 EIF3CLB5ME19 914 aaKnown RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 C10orf142B7Z368 130 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 TAF4O00268 1085 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 FGF10O15520 208 aaPredicted RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 ZNF821O75541 412 aaPredicted RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 HTR7P34969 479 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 GJC1P36383 396 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 ARL4AP40617 200 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 MAGEA1P43355 309 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 E2F1Q01094 437 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 SEMG2Q02383 582 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 TARDBPQ13148 414 aaKnown RBP eCLIP15.32■□□□□ 0.04
VARS-223ENST00000474643 ZNF211Q13398 564 aaPredicted RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 SMTNL2Q2TAL5 461 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 MYLK3Q32MK0 819 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 TMEM259Q4ZIN3 620 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 BOLA3Q53S33 107 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 ZNF542PQ5EBM4 170 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 KYAT3Q6YP21 454 aaKnown RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 GCNT7Q6ZNI0 430 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 PARGQ86W56 976 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 PLPP6Q8IY26 295 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 CCDC170Q8IYT3 715 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 ARFGAP1Q8N6T3 406 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 RTL3Q8N8U3 475 aaKnown RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 OR4C6Q8NH72 309 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 EIF3CQ99613 913 aaKnown RBP15.32■□□□□ 0.04
VARS-223ENST00000474643 DUSP23Q9BVJ7 150 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 ABCG4Q9H172 646 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 LCMT1Q9UIC8 334 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 CLCA2Q9UQC9 943 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 HS3ST3A1Q9Y663 406 aa15.32■□□□□ 0.04
VARS-223ENST00000474643 LAMA5O15230 3695 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 DSPP15924 2871 aaKnown RBP15.31■□□□□ 0.04
VARS-223ENST00000474643 RASA4BC9J798 803 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 RASA4O43374 803 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 PIAS2O75928 621 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 DUSP3P51452 185 aaPredicted RBP15.31■□□□□ 0.04
VARS-223ENST00000474643 CLDN6P56747 220 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
VARS-223ENST00000474643 PDE1CQ14123 709 aaPredicted RBP15.31■□□□□ 0.04
VARS-223ENST00000474643 KRT81Q14533 505 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 MESDQ14696 234 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 CA9Q16790 459 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 COL28A1Q2UY09 1125 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 LRRC69Q6ZNQ3 347 aa15.31■□□□□ 0.04
VARS-223ENST00000474643 ABI3BPQ7Z7G0 1075 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms