RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DIS3LQ8TF46 1054 aaKnown RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 SKA1Q96BD8 255 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 HAUS5O94927 633 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 F11P03951 625 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 NQO1P15559 274 aaKnown RBP21.95■■□□□ 1.1
CCM2-206ENST00000474617 SLC1A2P43004 574 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 SLC1A6P48664 564 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 MAXP61244 160 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 OVGP1Q12889 678 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 RIPK1Q13546 671 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 INO80DQ53TQ3 878 aaPredicted RBP21.95■■□□□ 1.1
CCM2-206ENST00000474617 PPM1JQ5JR12 505 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 ZNF470Q6ECI4 717 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 RFWD3Q6PCD5 774 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 METTL3Q86U44 580 aaKnown RBP21.95■■□□□ 1.1
CCM2-206ENST00000474617 FAM217AQ8IXS0 508 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.95■■□□□ 1.1
CCM2-206ENST00000474617 SLC25A41Q8N5S1 370 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 GPR150Q8NGU9 434 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 PRICKLE1Q96MT3 831 aaPredicted RBP21.95■■□□□ 1.1
CCM2-206ENST00000474617 IL23AQ9NPF7 189 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 HEY2Q9UBP5 337 aa21.95■■□□□ 1.1
CCM2-206ENST00000474617 LSM7Q9UK45 103 aaKnown RBP21.95■■□□□ 1.1
CCM2-206ENST00000474617 RPL26L1Q9UNX3 145 aaKnown RBP21.95■■□□□ 1.1
CCM2-206ENST00000474617 FAM95CA0A1B0GW59 222 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 CRTAMO95727 393 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 C1RP00736 705 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 KLKB1P03952 638 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 MYL2P10916 166 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 MBL2P11226 248 aaPredicted RBP21.94■■□□□ 1.1
CCM2-206ENST00000474617 CSF2RAP15509 400 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 SERPINB5P36952 375 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 LRRC26Q2I0M4 334 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 MTDHQ86UE4 582 aaKnown RBP21.94■■□□□ 1.1
CCM2-206ENST00000474617 ARID3BQ8IVW6 561 aaPredicted RBP21.94■■□□□ 1.1
CCM2-206ENST00000474617 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCM2-206ENST00000474617 STYXQ8WUJ0 223 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 USP13Q92995 863 aaPredicted RBP21.94■■□□□ 1.1
CCM2-206ENST00000474617 ZBP1Q9H171 429 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 CEP350Q5VT06 3117 aa21.94■■□□□ 1.1
CCM2-206ENST00000474617 INSIG1O15503 277 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 TRIM13O60858 407 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 FGF19O95750 216 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 PRKCGP05129 697 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 ALOX15P16050 662 aaPredicted RBP21.93■■□□□ 1.1
CCM2-206ENST00000474617 PSMA3P25788 255 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 CHRNA4P43681 627 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 ABCE1P61221 599 aaKnown RBP21.93■■□□□ 1.1
CCM2-206ENST00000474617 PRAMEP78395 509 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 MPP7Q5T2T1 576 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 MRNIPQ6NTE8 343 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 C16orf46Q6P387 395 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 CYB5D1Q6P9G0 228 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 ZYG11AQ6WRX3 759 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 C10orf107Q8IVU9 208 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 KIRREL3Q8IZU9 778 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 CFAP52Q8N1V2 620 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 MRPS31Q92665 395 aaKnown RBP21.93■■□□□ 1.1
CCM2-206ENST00000474617 CCDC126Q96EE4 140 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 PAWRQ96IZ0 340 aaKnown RBP21.93■■□□□ 1.1
CCM2-206ENST00000474617 NUDCD1Q96RS6 583 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 KLC4Q9NSK0 619 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 GGT7Q9UJ14 662 aa21.93■■□□□ 1.1
CCM2-206ENST00000474617 TEX28O15482 410 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 KLHL2O95198 593 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 CDC25CP30307 473 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 RPS24P62847 133 aaKnown RBP21.92■■□□□ 1.1
CCM2-206ENST00000474617 HTRA4P83105 476 aaPredicted RBP21.92■■□□□ 1.1
CCM2-206ENST00000474617 ELMOD1Q8N336 334 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 FIBCD1Q8N539 461 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 OR13J1Q8NGT2 312 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 MYEOVQ96EZ4 313 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 THOC1Q96FV9 657 aaKnown RBP21.92■■□□□ 1.1
CCM2-206ENST00000474617 ATXN7L3BQ96GX2 97 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 SPON2Q9BUD6 331 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 C1QTNF1Q9BXJ1 281 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 RNF38Q9H0F5 515 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 ATXN3LQ9H3M9 355 aa21.92■■□□□ 1.1
CCM2-206ENST00000474617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCM2-206ENST00000474617 APOBEC2Q9Y235 224 aaKnown RBP21.92■■□□□ 1.1
CCM2-206ENST00000474617 A0A0D9SEW6 157 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 CCDC195A0A1B0GUA6 201 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 TRIM43BA6NCK2 446 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 LDB2O43679 373 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 MGRN1O60291 552 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 ADH1AP07327 375 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 SLC35E2BP0CK96 405 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 CR2P20023 1033 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 OGNP20774 298 aaKnown RBP21.91■■□□□ 1.1
CCM2-206ENST00000474617 GABRB3P28472 473 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 SLC7A9P82251 487 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 SMAD3P84022 425 aaKnown RBP21.91■■□□□ 1.1
CCM2-206ENST00000474617 SLC20A2Q08357 652 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 FAM83EQ2M2I3 478 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 LIPMQ5VYY2 423 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 Q6ZNB5 142 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 TBC1D1Q86TI0 1168 aaPredicted RBP21.91■■□□□ 1.1
CCM2-206ENST00000474617 CILP2Q8IUL8 1156 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 OR7D4Q8NG98 312 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 TTC8Q8TAM2 541 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms