RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 EI24O14681 340 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 UBDO15205 165 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 ACOX3O15254 700 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 NRP2O60462 931 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 RASAL1O95294 804 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 PRKCBP05771 671 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 NFICP08651 508 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC35E2BP0CK96 405 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 OPRL1P41146 370 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC6A3Q01959 620 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 CYBRD1Q53TN4 286 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 C6orf183Q5T699 404 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 TSTD2Q5T7W7 516 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 ANKRD13AQ8IZ07 590 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 CCDC185Q8N715 623 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 PDPRQ8NCN5 879 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 OMDQ99983 421 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 B3GNT5Q9BYG0 378 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 SEZ6LQ9BYH1 1024 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 IARS2Q9NSE4 1012 aaKnown RBP18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 GTF2IRD1Q9UHL9 959 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 USP3Q9Y6I4 520 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 VWA5AO00534 786 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 CYP2C9P11712 490 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 FASP25445 335 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 CAPGP40121 348 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 EFNA5P52803 228 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 NDST1P52848 882 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 KCNJ8Q15842 424 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 NEPROQ6NW34 567 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 CNSTQ6PJW8 725 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 SPPL2CQ8IUH8 684 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 CMTR2Q8IYT2 770 aaKnown RBP18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 BPIFB6Q8NFQ5 453 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 GLT1D1Q96MS3 346 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 GPR22Q99680 433 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 FANCEQ9HB96 536 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 HACD3Q9P035 362 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 IFT80Q9P2H3 777 aaPredicted RBP18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 PSME2Q9UL46 239 aa18.78■□□□□ 0.6
ECHDC1-214ENST00000474289 SEC14L2O76054 403 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 HNRNPLP14866 589 aaKnown RBP eCLIP18.77■□□□□ 0.61e-9■□□□□ 8.8
ECHDC1-214ENST00000474289 C1QTNF8P60827 252 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 PLCL1Q15111 1095 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 PHKG1Q16816 387 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 ZNF618Q5T7W0 954 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 GADL1Q6ZQY3 521 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 SPRED1Q7Z699 444 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 DHRSXQ8N5I4 330 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 USP33Q8TEY7 942 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 ZC3H15Q8WU90 426 aaKnown RBP18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 SNX19Q92543 992 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 HPS1Q92902 700 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 CENPNQ96H22 339 aaPredicted RBP18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 ZNF641Q96N77 438 aaPredicted RBP18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 ZNF347Q96SE7 839 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 CSF3RQ99062 836 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 GMLQ99445 158 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC25A23Q9BV35 468 aa18.77■□□□□ 0.6
ECHDC1-214ENST00000474289 B4GAT1O43505 415 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 S100A1P23297 94 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 OXTRP30559 389 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 IFRD2Q12894 506 aaPredicted RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 USP10Q14694 798 aaKnown RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 GOLGA7BQ2TAP0 167 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 PERM1Q5SV97 790 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 FRA10AC1Q70Z53 315 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 RAB2BQ8WUD1 216 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 ZUFSPQ96AP4 578 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 SLC45A3Q96JT2 553 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 CGREF1Q99674 301 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 PSD2Q9BQI7 771 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 NIFKQ9BYG3 293 aaKnown RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 OSBPL2Q9H1P3 480 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 TPK1Q9H3S4 243 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 GPN2Q9H9Y4 310 aaPredicted RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 SMPD3Q9NY59 655 aaPredicted RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 SUN2Q9UH99 717 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 SLC27A5Q9Y2P5 690 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 ST14Q9Y5Y6 855 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 C7P10643 843 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 HPCAL1P37235 193 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 BFSP2Q13515 415 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 ZNF460Q14592 562 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 ERO1BQ86YB8 467 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 SPATA6LQ8N4H0 392 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 DNAAF3Q8N9W5 541 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 CCNYQ8ND76 341 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 ABHD11Q8NFV4 315 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 PNPT1Q8TCS8 783 aaKnown RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 CDHR1Q96JP9 859 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 HGH1Q9BTY7 390 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 GBA3Q9H227 469 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 PKD2L2Q9NZM6 624 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 BFARQ9NZS9 450 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 SCHIP1Q9P0W5 487 aaPredicted RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 EGFL7Q9UHF1 273 aa18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 ZNF638Q14966 1978 aaKnown RBP18.76■□□□□ 0.59
ECHDC1-214ENST00000474289 AQP12BA6NM10 295 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 NME4O00746 187 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms