RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PCDH18Q9HCL0 1135 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 FZD3Q9NPG1 666 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 CTTNBP2NLQ9P2B4 639 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 UVRAGQ9P2Y5 699 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 IPO11Q9UI26 975 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 GGT7Q9UJ14 662 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 ITM2BQ9Y287 266 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 NEUROG3Q9Y4Z2 214 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 FAM221BA6H8Z2 402 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 POM121BA6NF01 834 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 A6NNZ2 444 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 FPGTO14772 594 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 RAD51BO15315 384 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 SPINT1O43278 529 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 AKR1B10O60218 316 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 PROSCO94903 275 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
CKS1B-206ENST00000474215 IL4RP24394 825 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 ADKP55263 362 aaKnown RBP11.31□□□□□ -0.6
CKS1B-206ENST00000474215 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 ARHGAP36Q6ZRI8 547 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 Q6ZSR6 202 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 TP53INP2Q8IXH6 220 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 EID2Q8N6I1 236 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 TSC1Q92574 1164 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 CCDC42Q96M95 316 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 ZNF599Q96NL3 588 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 TUBGCP5Q96RT8 1024 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 KLF6Q99612 283 aaPredicted RBP11.31□□□□□ -0.6
CKS1B-206ENST00000474215 CHP1Q99653 195 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 CALN1Q9BXU9 219 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 SUV39H2Q9H5I1 410 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 ABHD10Q9NUJ1 306 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 ETNK2Q9NVF9 386 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 TOR4AQ9NXH8 423 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 RCOR3Q9P2K3 495 aaPredicted RBP11.31□□□□□ -0.6
CKS1B-206ENST00000474215 FTSJ1Q9UET6 329 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 LCMT1Q9UIC8 334 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 KLK13Q9UKR3 277 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 FRYQ5TBA9 3013 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 KNL1Q8NG31 2342 aa11.31□□□□□ -0.6
CKS1B-206ENST00000474215 TSPAN11A1L157 253 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 MMP20O60882 483 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 MFAP3LO75121 409 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 DKK1O94907 266 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 PIGNO95427 931 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 LDOC1O95751 146 aaPredicted RBP11.3□□□□□ -0.6
CKS1B-206ENST00000474215 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 ITIH2P19823 946 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 RGRP47804 291 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 RENBPP51606 427 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 CDH6P55285 790 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 SLC10A7Q0GE19 358 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 ELP6Q0PNE2 266 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 KRT81Q14533 505 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 LBRQ14739 615 aaKnown RBP11.3□□□□□ -0.6
CKS1B-206ENST00000474215 UGP2Q16851 508 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 CFAP58Q5T655 872 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 TMCO4Q5TGY1 634 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 BRAT1Q6PJG6 821 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 KANSL1Q7Z3B3 1105 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 CAMK1DQ8IU85 385 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 CENPTQ96BT3 561 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 IFT43Q96FT9 208 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 PSKH2Q96QS6 385 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 CINPQ9BW66 212 aaPredicted RBP11.3□□□□□ -0.6
CKS1B-206ENST00000474215 ATP13A3Q9H7F0 1226 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
CKS1B-206ENST00000474215 SEPT3Q9UH03 358 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 ACACBO00763 2458 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 AKAP13Q12802 2813 aa11.3□□□□□ -0.6
CKS1B-206ENST00000474215 SPTY2D1-AS1A0A0U1RR47 76 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 C1QTNF9BB2RNN3 333 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 AKR1B15C9JRZ8 316 aaPredicted RBP11.29□□□□□ -0.6
CKS1B-206ENST00000474215 MUSKO15146 869 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 MAFKO60675 156 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 TM7SF2O76062 418 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 PEX11BO96011 259 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 PROS1P07225 676 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 CD48P09326 243 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 C1QTNF9P0C862 333 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SERPINA4P29622 427 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SERPINB6P35237 376 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 RABIFP47224 123 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SCNN1BP51168 640 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 ARSEP51690 589 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 BCL2L1Q07817 233 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 TBX2Q13207 712 aaPredicted RBP11.29□□□□□ -0.6
CKS1B-206ENST00000474215 PDK2Q15119 407 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms