RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 FZD3Q9NPG1 666 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 LUC7LQ9NQ29 371 aaKnown RBP19.15■□□□□ 0.66
PTCD3-210ENST00000473829 DKK3Q9UBP4 350 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 DMTF1Q9Y222 760 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 FNDC3AQ9Y2H6 1198 aaKnown RBP19.15■□□□□ 0.66
PTCD3-210ENST00000473829 LRRK1Q38SD2 2015 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 A0A0U1RQJ8 604 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 ZNF487B1APH4 448 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 KCNK3O14649 394 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 AREL1O15033 823 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 SLC31A1O15431 190 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 OPHN1O60890 802 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 TIMP2P16035 220 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 CR2P20023 1033 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 CD38P28907 300 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 CTSKP43235 329 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 MARCKSL1P49006 195 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 ZNF235Q14590 738 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 ADAT2Q7Z6V5 191 aaKnown RBP19.14■□□□□ 0.65
PTCD3-210ENST00000473829 TMEM145Q8NBT3 493 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 TPCN2Q8NHX9 752 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 RAB7BQ96AH8 199 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 RNF25Q96BH1 459 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-210ENST00000473829 TUBGCP5Q96RT8 1024 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 DESI2Q9BSY9 194 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 SUV39H2Q9H5I1 410 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 DTLQ9NZJ0 730 aa19.14■□□□□ 0.65
PTCD3-210ENST00000473829 CNOT1A5YKK6 2376 aaKnown RBP19.13■□□□□ 0.65
PTCD3-210ENST00000473829 PSTPIP1O43586 416 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 IPO7O95373 1038 aaKnown RBP19.13■□□□□ 0.65
PTCD3-210ENST00000473829 CD59P13987 128 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 NUDT1P36639 197 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 SCNN1BP51168 640 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 VAV2P52735 878 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 MAXP61244 160 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 NSUN2Q08J23 767 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTCD3-210ENST00000473829 PPM1JQ5JR12 505 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 SLC9A4Q6AI14 798 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 KIAA1161Q6NSJ0 714 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 MFSD7Q6UXD7 560 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 TTC7BQ86TV6 843 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 VSIG1Q86XK7 387 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 MAML1Q92585 1016 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 MGME1Q9BQP7 344 aa19.13■□□□□ 0.65
PTCD3-210ENST00000473829 DDX56Q9NY93 547 aaKnown RBP19.13■□□□□ 0.65
PTCD3-210ENST00000473829 SPTBN2O15020 2390 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 IGLON5A6NGN9 336 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 BTNL10A8MVZ5 291 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 PRAMEF26H0Y7S4 382 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 H0Y8X5 98 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 GIPC1O14908 333 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 RAD51BO15315 384 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 PJA2O43164 708 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 TSPAN6O43657 245 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 CER1O95813 267 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 PRKCGP05129 697 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 MMP13P45452 471 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 C21orf59P57076 290 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 RPS21P63220 83 aaKnown RBP19.12■□□□□ 0.65
PTCD3-210ENST00000473829 GRM3Q14832 879 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 IL27RAQ6UWB1 636 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 NPNTQ6UXI9 565 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 DAAM2Q86T65 1068 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 LRRC49Q8IUZ0 686 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 TEX26Q8N6G2 289 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 KRT35Q92764 455 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 ECHDC3Q96DC8 303 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 ZNF641Q96N77 438 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-210ENST00000473829 ATP13A3Q9H7F0 1226 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 TRIM10Q9UDY6 481 aa19.12■□□□□ 0.65
PTCD3-210ENST00000473829 MED19A0JLT2 244 aaPredicted RBP19.11■□□□□ 0.65
PTCD3-210ENST00000473829 UPK3BL1B0FP48 263 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 UPK3BL2E5RIL1 263 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 NEMP1O14524 444 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 TRAFD1O14545 582 aaPredicted RBP19.11■□□□□ 0.65
PTCD3-210ENST00000473829 KCNA4P22459 653 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 HNRNPA2B1P22626 353 aaKnown RBP19.11■□□□□ 0.65
PTCD3-210ENST00000473829 SERPINA4P29622 427 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 CDKN2BP42772 138 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 RENBPP51606 427 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 CLDN2P57739 230 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 NXPH1P58417 271 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 AP1S1P61966 158 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 SEMG2Q02383 582 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 BCL2L1Q07817 233 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 LLGL1Q15334 1064 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 TAZQ16635 292 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 IFI16Q16666 785 aaKnown RBP19.11■□□□□ 0.65
PTCD3-210ENST00000473829 UGP2Q16851 508 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 ZNF423Q2M1K9 1284 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 PRAMEF14Q5SWL7 426 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 FAM182AQ5T1J6 154 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 MARC1Q5VT66 337 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 KDM7AQ6ZMT4 941 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 GCNT7Q6ZNI0 430 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 ERMP1Q7Z2K6 904 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 PIP4P1Q86T03 277 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 SPATS2Q86XZ4 545 aaKnown RBP19.11■□□□□ 0.65
PTCD3-210ENST00000473829 RFX6Q8HWS3 928 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 MFSD2AQ8NA29 543 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms