RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 ITPKAP23677 461 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 PSMA5P28066 241 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 CDC25BP30305 580 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 NMT1P30419 496 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 RYKP34925 604 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 GRK5P34947 590 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 SREBF1P36956 1147 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 CAPGP40121 348 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 CASP4P49662 377 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ZNF157P51786 506 aaPredicted RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 MAP2K6P52564 334 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 NLRP11P59045 1033 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 GRIN1Q05586 938 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 TGM3Q08188 693 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 GOLGA8FQ08AF8 430 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 GOLGA8DPQ0D2H9 430 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 SF3A3Q12874 501 aaKnown RBP eCLIP3.28□□□□□ -1.881e-6■□□□□ 9.2
TTC3-214ENST00000472398 CALCOCO2Q13137 446 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 MADCAM1Q13477 382 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 CBFBQ13951 182 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 LARS2Q15031 903 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 RRS1Q15050 365 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 KRT31Q15323 416 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 FSCN1Q16658 493 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 PABPC1LQ4VXU2 614 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 C3orf38Q5JPI3 329 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 PAGE2BQ5JRK9 111 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 TMEM31Q5JXX7 168 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 CEP85LQ5SZL2 805 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 DAB2IPQ5VWQ8 1189 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ETFRF1Q6IPR1 90 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 AFTPHQ6ULP2 937 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 RFPL4BQ6ZWI9 263 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ZNF365Q70YC5 407 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 RAB44Q7Z6P3 723 aaPredicted RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 CLVS1Q8IUQ0 354 aaPredicted RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 CHERPQ8IWX8 916 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 ARFGAP2Q8N6H7 521 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 DTX3Q8N9I9 347 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ASCC1Q8N9N2 400 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 LEMD2Q8NC56 503 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 SLC24A4Q8NFF2 622 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 FLAD1Q8NFF5 587 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 FANK1Q8TC84 345 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 EDAQ92838 391 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 TNFRSF14Q92956 283 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 MTFMTQ96DP5 389 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 FAM71F1Q96KD3 344 aaPredicted RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 KCNK16Q96T55 309 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 MMP19Q99542 508 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 FDXACB1Q9BRP7 624 aaPredicted RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 PBX4Q9BYU1 374 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 POTEKPQ9BYX7 375 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 GBA3Q9H227 469 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 SLC6A15Q9H2J7 730 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 IKZF4Q9H2S9 585 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ADAM7Q9H2U9 754 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ZFYVE1Q9HBF4 777 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 PRDM6Q9NQX0 595 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 THAP1Q9NVV9 213 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 GALNT8Q9NY28 637 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ARHGAP20Q9P2F6 1191 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ZNF70Q9UC06 446 aaPredicted RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 PADI1Q9ULC6 663 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 MTMR6Q9Y217 621 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ZKSCAN5Q9Y2L8 839 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 PTRH2Q9Y3E5 179 aaKnown RBP3.28□□□□□ -1.88
TTC3-214ENST00000472398 RWDD3Q9Y3V2 267 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 HS3ST4Q9Y661 456 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 NFS1Q9Y697 457 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 ACEP12821 1306 aa3.28□□□□□ -1.88
TTC3-214ENST00000472398 CPDO75976 1380 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 C1QTNF9BB2RNN3 333 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 GCOM1H8Y6P7 765 aaPredicted RBP3.27□□□□□ -1.89
TTC3-214ENST00000472398 LINC01387J3KSC0 135 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 MEIS2O14770 477 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 CIB2O75838 187 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 HTR3BO95264 441 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 OR2C1O95371 312 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 TP53P04637 393 aaPredicted RBP3.27□□□□□ -1.89
TTC3-214ENST00000472398 PCCBP05166 539 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 TFPTP0C1Z6 253 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 EPXP11678 715 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 NME1P15531 152 aaKnown RBP3.27□□□□□ -1.89
TTC3-214ENST00000472398 GJA1P17302 382 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 TNFRSF1AP19438 455 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 CMA1P23946 247 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 G0S2P27469 103 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 RRM2P31350 389 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 SLC26A3P40879 764 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 ERFP50548 548 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 CLCN5P51795 746 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 SLC7A2P52569 658 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 COPB1P53618 953 aaKnown RBP3.27□□□□□ -1.89
TTC3-214ENST00000472398 STX17P56962 302 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 SKP1P63208 163 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 CYP4F2P78329 520 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 RASGEF1BQ0VAM2 473 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 TROAPQ12815 778 aa3.27□□□□□ -1.89
TTC3-214ENST00000472398 OVGP1Q12889 678 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms