RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 PID1Q7Z2X4 250 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 ZNF567Q8N184 647 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRKCB-205ENST00000472066 OR14C36Q8NHC7 312 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 NKD2Q969F2 451 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-205ENST00000472066 ZC3H10Q96K80 434 aaKnown RBP12.45□□□□□ -0.42
PRKCB-205ENST00000472066 GPR174Q9BXC1 333 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 DUSP15Q9H1R2 295 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-205ENST00000472066 EPC1Q9H2F5 836 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 KDM4CQ9H3R0 1056 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 GLOD4Q9HC38 313 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
PRKCB-205ENST00000472066 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-205ENST00000472066 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 CKAP5Q14008 2032 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 TSPAN11A1L157 253 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 HTRA2O43464 458 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 PLRG1O43660 514 aaKnown RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 RHOBTB1O94844 696 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SEMA4FO95754 770 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 MMP2P08253 660 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SERPINF2P08697 491 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 ADRB3P13945 408 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 TIMP2P16035 220 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 CASQ1P31415 396 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 CD68P34810 354 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 ADPRHP54922 357 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 TAS2R38P59533 333 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SKOR1P84550 965 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 RPL6Q02878 288 aaKnown RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SNX1Q13596 522 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 OASLQ15646 514 aaKnown RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 BRAT1Q6PJG6 821 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SYT10Q6XYQ8 523 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 PRR23BQ6ZRT6 265 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 NYAP1Q6ZVC0 841 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 TTC7BQ86TV6 843 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 PRPF39Q86UA1 669 aaKnown RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 ZSWIM9Q86XI8 627 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 TMEFF1Q8IYR6 380 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 DEFB119Q8N690 84 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 FAM71DQ8N9W8 422 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 CADM4Q8NFZ8 388 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 ACTRT1Q8TDG2 376 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 RAB7BQ96AH8 199 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 ECHDC3Q96DC8 303 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 IMP4Q96G21 291 aaKnown RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 NAP1L3Q99457 506 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SLC25A51Q9H1U9 297 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SEMA4AQ9H3S1 761 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 HOMER3Q9NSC5 361 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 KLHL8Q9P2G9 620 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-205ENST00000472066 RAI2Q9Y5P3 530 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 SAR1BQ9Y6B6 198 aa12.44□□□□□ -0.42
PRKCB-205ENST00000472066 CACNA1IQ9P0X4 2223 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3DA0A087WVF3 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3EA0A087X179 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3KA0A087X1G2 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 A0A1W2PQ67 120 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 CFAP69A5D8W1 941 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3FA6NER0 549 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 FAM47DPA6NHR8 397 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 LRRC72A6NJI9 287 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3LB9A6J9 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 AP1G1O43747 822 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 SOCS5O75159 536 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 STK10O94804 968 aaKnown RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3HP0C7X1 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 NFKB1P19838 968 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 STIP1P31948 543 aaKnown RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 CD86P42081 329 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 ABL2P42684 1182 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 POLR2LP62875 67 aaKnown RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TRAF2Q12933 501 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 ELF2Q15723 593 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 UGP2Q16851 508 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 SPDYCQ5MJ68 293 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 ANKRD20A2Q5SQ80 823 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 CFAP58Q5T655 872 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 ANKRD20A1Q5TYW2 823 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 ANKRD20A3Q5VUR7 823 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 PMS2CLQ68D20 193 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3GQ6DHY5 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3CQ6IPX1 549 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 DRICH1Q6PGQ1 229 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 LPCAT2Q7L5N7 544 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 PRELID2Q8N945 189 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 OR2T34Q8NGX1 318 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 SPATA22Q8NHS9 363 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 PDCD6IPQ8WUM4 868 aaKnown RBP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 FCRL5Q96RD9 977 aa12.43□□□□□ -0.42
PRKCB-205ENST00000472066 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRKCB-205ENST00000472066 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms