RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 UHRF1Q96T88 793 aaPredicted RBP19.4■□□□□ 0.7
PSPC1-203ENST00000471658 HEPHQ9BQS7 1158 aa19.4■□□□□ 0.7
PSPC1-203ENST00000471658 PARD6BQ9BYG5 372 aa19.4■□□□□ 0.7
PSPC1-203ENST00000471658 TBC1D17Q9HA65 648 aa19.4■□□□□ 0.7
PSPC1-203ENST00000471658 STK25O00506 426 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 CTIFO43310 598 aaKnown RBP19.39■□□□□ 0.69
PSPC1-203ENST00000471658 LEFTY1O75610 366 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 PRLP01236 227 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 MYBL2P10244 700 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 TPSB2P20231 275 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 VSNL1P62760 191 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 BCL2L1Q07817 233 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 MORF4L2Q15014 288 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 TPSAB1Q15661 275 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 ZNF534Q76KX8 674 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 SLC25A41Q8N5S1 370 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.69
PSPC1-203ENST00000471658 OR52K1Q8NGK4 314 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 KCNV2Q8TDN2 545 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 PDCD6IPQ8WUM4 868 aaKnown RBP19.39■□□□□ 0.69
PSPC1-203ENST00000471658 SMIM14Q96QK8 99 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 GABRG3Q99928 467 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 VPS45Q9NRW7 570 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 SARDHQ9UL12 918 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 NFU1Q9UMS0 254 aa19.39■□□□□ 0.69
PSPC1-203ENST00000471658 MRPS17Q9Y2R5 130 aaKnown RBP19.39■□□□□ 0.69
PSPC1-203ENST00000471658 A0A1W2PQF6 199 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 NPC1O15118 1278 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 SUN1O94901 812 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 UGT2B4P06133 528 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 METAP1P53582 386 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 CDK18Q07002 472 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 HLTFQ14527 1009 aaKnown RBP eCLIP19.38■□□□□ 0.69
PSPC1-203ENST00000471658 POM121L1PQ3SYA9 428 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 RALGPS1Q5JS13 557 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 DENND5AQ6IQ26 1287 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 SDE2Q6IQ49 451 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 BBOF1Q8ND07 529 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 TRIB3Q96RU7 358 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 TBL1YQ9BQ87 522 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 TDRD1Q9BXT4 1180 aaKnown RBP19.38■□□□□ 0.69
PSPC1-203ENST00000471658 CPEB1Q9BZB8 566 aaKnown RBP19.38■□□□□ 0.69
PSPC1-203ENST00000471658 ATP13A3Q9H7F0 1226 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 LRRC40Q9H9A6 602 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 EIF2B3Q9NR50 452 aaKnown RBP19.38■□□□□ 0.69
PSPC1-203ENST00000471658 IL36AQ9UHA7 158 aa19.38■□□□□ 0.69
PSPC1-203ENST00000471658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.37■□□□□ 0.69
PSPC1-203ENST00000471658 LOC285095A0A1B0GVY8 99 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 TRAFD1O14545 582 aaPredicted RBP19.37■□□□□ 0.69
PSPC1-203ENST00000471658 PSMD3O43242 534 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 AVILO75366 819 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 RAD51Q06609 339 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 GAS6Q14393 721 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 GALNT3Q14435 633 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 PTPRRQ15256 657 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 FNBP1LQ5T0N5 605 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 RANBP10Q6VN20 620 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 CCNI2Q6ZMN8 369 aaPredicted RBP19.37■□□□□ 0.69
PSPC1-203ENST00000471658 CAND1Q86VP6 1230 aaKnown RBP19.37■□□□□ 0.69
PSPC1-203ENST00000471658 HOOK3Q86VS8 718 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 ZSWIM9Q86XI8 627 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 SUV39H2Q9H5I1 410 aa19.37■□□□□ 0.69
PSPC1-203ENST00000471658 GOLGA6CA6NDK9 693 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 GOLGA6BA6NDN3 693 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 HTRA2O43464 458 aaPredicted RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 FZD6O60353 706 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PDGFBP01127 241 aaPredicted RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 ATXN1LP0C7T5 689 aaKnown RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 GOLGA6DP0CG33 693 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 HOXB2P14652 356 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 TPH1P17752 444 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 MAPK8P45983 427 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 CAMK2GQ13555 558 aaPredicted RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 TMEM92Q6UXU6 159 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 GDPD4Q6W3E5 623 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PPP1R21Q6ZMI0 780 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 MCUQ8NE86 351 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 OR8D1Q8WZ84 308 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 IFT43Q96FT9 208 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 KLHL32Q96NJ5 620 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PPP1R2P1Q96PQ5 205 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 FSD1LQ9BXM9 530 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 C2orf42Q9NWW7 574 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 GOLGA6AQ9NYA3 693 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SHOC2Q9UQ13 582 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PCDHB9Q9Y5E1 797 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 ERI2A8K979 691 aaKnown RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SYNCRIPO60506 623 aaKnown RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 BANF1O75531 89 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SERPINA4P29622 427 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SLC8A1P32418 973 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 CDK16Q00536 496 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 CUL1Q13616 776 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 ELAVL3Q14576 367 aaKnown RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 E2F5Q15329 346 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SLC14A2Q15849 920 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 MSS51Q4VC12 460 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SIRPB2Q5JXA9 342 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 TRMT11Q7Z4G4 463 aaKnown RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 CACUL1Q86Y37 369 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms