RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ACDQ96AP0 544 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 TLCD1Q96CP7 247 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 TMA16Q96EY4 203 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 HMCESQ96FZ2 354 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 IMP4Q96G21 291 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CELF6Q96J87 481 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZSWIM3Q96MP5 696 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 DHRS4Q9BTZ2 278 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 C2orf49Q9BVC5 232 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SLC2A11Q9BYW1 496 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 POLR1EQ9GZS1 481 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 C10orf88Q9H8K7 445 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PDFQ9HBH1 243 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 LRRC4CQ9HCJ2 640 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 TRPC7Q9HCX4 862 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PARD6AQ9NPB6 346 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CASS4Q9NQ75 786 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 TDP1Q9NUW8 608 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PSD3Q9NYI0 1048 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 MARK1Q9P0L2 795 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SEPT10Q9P0V9 454 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZC3H7BQ9UGR2 993 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF180Q9UJW8 692 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 RIMKLBQ9ULI2 386 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 FAM237BA0A1B0GVD1 139 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 EXOC1LA0A1B0GW35 172 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 TCRBV7S3A2A0A539 114 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SHISA7A6NL88 538 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CHURC1-FNTBB4DL54 471 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 H3BQF6 201 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 LEFTY2O00292 366 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 RGS16O15492 202 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 KRT37O76014 449 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CNTN5O94779 1100 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 PENKP01210 267 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 RHOCP08134 193 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 NFKB1P19838 968 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CA4P22748 312 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 HOXD9P28356 352 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CTHP32929 405 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CCR2P41597 374 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 FNTBP49356 437 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SLC18A1P54219 525 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 NSUN2Q08J23 767 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 LBRQ14739 615 aaKnown RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 TEAD2Q15562 447 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 ITPRIPL2Q3MIP1 535 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 BBS9Q3SYG4 887 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SPANXN3Q5MJ09 141 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 FNBP1LQ5T0N5 605 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 GPR158Q5T848 1215 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 LGSNQ5TDP6 509 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 FYB2Q5VWT5 728 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 C3orf62Q6ZUJ4 267 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 TFAP2DQ7Z6R9 452 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 PRUNE1Q86TP1 453 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 MAB21L3Q8N8X9 362 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 FBXO36Q8NEA4 188 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 FIBINQ8TAL6 211 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 BPIFB1Q8TDL5 484 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 GAB3Q8WWW8 586 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CDKL2Q92772 493 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 USP13Q92995 863 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 MTBPQ96DY7 904 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 STAMBPL1Q96FJ0 436 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SIGLEC10Q96LC7 697 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 AGAP3Q96P47 875 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SRPK1Q96SB4 655 aaKnown RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 MGME1Q9BQP7 344 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SLC46A2Q9BY10 475 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 VPS37BQ9H9H4 285 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SSU72Q9NP77 194 aaKnown RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 RBM22Q9NW64 420 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 NSMCE4AQ9NXX6 385 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 EURLQ9NYK6 297 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SAMD15Q9P1V8 674 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 VPS18Q9P253 973 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 CFAP97Q9P2B7 532 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 PSMC3IPQ9P2W1 217 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-207ENST00000471218 SLC8A2Q9UPR5 921 aa9.27□□□□□ -0.93
PTPRE-207ENST00000471218 KMT2BQ9UMN6 2715 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-207ENST00000471218 CHD8Q9HCK8 2581 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 TCRBV9S1A1TA0A576 114 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 K7ESF4 209 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 MOSPD3O75425 235 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 RPP40O75818 363 aaKnown RBP9.26□□□□□ -0.93
PTPRE-207ENST00000471218 USP1O94782 785 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 RHOBTB1O94844 696 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 POLBP06746 335 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 HLA-DPA1P20036 260 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 DRD1P21728 446 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 ADRA1AP35348 466 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 ELK3P41970 407 aa9.26□□□□□ -0.93
PTPRE-207ENST00000471218 CSNK1DP48730 415 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms