RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ARHGEF38Q9NXL2 777 aa19.23■□□□□ 0.67
NCKIPSD-209ENST00000470006 AKAP7Q9P0M2 348 aaPredicted RBP19.23■□□□□ 0.67
NCKIPSD-209ENST00000470006 CNTN6Q9UQ52 1028 aa19.23■□□□□ 0.67
NCKIPSD-209ENST00000470006 PAXBP1Q9Y5B6 917 aa19.23■□□□□ 0.67
NCKIPSD-209ENST00000470006 ACTL7AQ9Y615 435 aa19.23■□□□□ 0.67
NCKIPSD-209ENST00000470006 DRGXA6NNA5 263 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 TOR1BO14657 336 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 RASGRP1O95267 797 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 CD82P27701 267 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 HTR1BP28222 390 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 SULT1E1P49888 294 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 SNX16P57768 344 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 ARF5P84085 180 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 STIM1Q13586 685 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 KLHL40Q2TBA0 621 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 DRC7Q8IY82 874 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 CEP63Q96MT8 703 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 KLHL32Q96NJ5 620 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 WRAP53Q9BUR4 548 aaKnown RBP19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 INTS2Q9H0H0 1204 aaKnown RBP19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 RNF215Q9Y6U7 377 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 CHD5Q8TDI0 1954 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 USP9YO00507 2555 aaPredicted RBP19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 NOTCH2Q04721 2471 aa19.22■□□□□ 0.67
NCKIPSD-209ENST00000470006 C9orf172C9J069 976 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 ZMPSTE24O75844 475 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 CXCR3P49682 368 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 ATP1A2P50993 1020 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 POLE2P56282 527 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 FOXK1P85037 733 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 SLC6A3Q01959 620 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 GNA12Q03113 381 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 DEUP1Q05D60 604 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 SERINC3Q13530 473 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 ARHGEF7Q14155 803 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 NCAPHQ15003 741 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 POLD3Q15054 466 aaPredicted RBP19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 ALG11Q2TAA5 492 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 ZNF783Q6ZMS7 281 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 DTX1Q86Y01 620 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 ZNF683Q8IZ20 524 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 WDTC1Q8N5D0 677 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 TMPRSS4Q9NRS4 437 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 STAP1Q9ULZ2 295 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 MAN2B2Q9Y2E5 1009 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 MYO9AB2RTY4 2548 aa19.21■□□□□ 0.67
NCKIPSD-209ENST00000470006 RELNP78509 3460 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 TMEM110-MUSTN1A8MSY1 372 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 PSMA7O14818 248 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 SMC2O95347 1197 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 CCR10P46092 362 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 SRP54P61011 504 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 SNRPD1P62314 119 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 ZFP36L1Q07352 338 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 IRF4Q15306 451 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 MAP9Q49MG5 647 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 COBLL1Q53SF7 1204 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 OLFML1Q6UWY5 402 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 C1orf74Q96LT6 269 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 RRN3Q9NYV6 651 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 KLQ9UEF7 1012 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 DOCK4Q8N1I0 1966 aa19.2■□□□□ 0.66
NCKIPSD-209ENST00000470006 STMND1H3BQB6 276 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 POP4O95707 220 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 F9P00740 461 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 TNFP01375 233 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 ERBB2P04626 1255 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 GLB1P16278 677 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 TFE3P19532 575 aaPredicted RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 XPAP23025 273 aaPredicted RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 CASRP41180 1078 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 PEX5P50542 639 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 ARHGAP44Q17R89 818 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 TAF8Q7Z7C8 310 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 FAM26EQ8N5C1 309 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 IL22RA1Q8N6P7 574 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 TP53I13Q8NBR0 393 aaPredicted RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 C1orf131Q8NDD1 294 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 FAM46DQ8NEK8 389 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 ATL2Q8NHH9 583 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 ISG20Q96AZ6 181 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 GSDMAQ96QA5 445 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 NPY6RQ99463 290 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 SLC12A9Q9BXP2 914 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 OSBPL1AQ9BXW6 950 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 ZYG11BQ9C0D3 744 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 LRRC4CQ9HCJ2 640 aa19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 ZNF71Q9NQZ8 489 aaPredicted RBP19.19■□□□□ 0.66
NCKIPSD-209ENST00000470006 BLACEA4D250 179 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 I6L893 689 aaPredicted RBP19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 AREL1O15033 823 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 ITIH2P19823 946 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 LRRC14Q15048 493 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 MYLK3Q32MK0 819 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 ACBD5Q5T8D3 534 aaPredicted RBP19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 OTUD1Q5VV17 481 aaPredicted RBP19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 ISM2Q6H9L7 571 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 KLHL10Q6JEL2 608 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms