RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 PHACTR1Q9C0D0 580 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 SUV39H2Q9H5I1 410 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 C10orf88Q9H8K7 445 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 POLMQ9NP87 494 aaPredicted RBP11.39□□□□□ -0.59
MSH5-214ENST00000468602 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 GOLGA6AQ9NYA3 693 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 IL36AQ9UHA7 158 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
MSH5-214ENST00000468602 CACNA1IQ9P0X4 2223 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 ANKRD36A6QL64 1941 aa11.39□□□□□ -0.59
MSH5-214ENST00000468602 C1QTNF3-AMACRE9PGA6 284 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 K7ESF4 209 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 TP73O15350 636 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 RAD51CO43502 376 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 AP1G1O43747 822 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 SYNCRIPO60506 623 aaKnown RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 RNASEH1O60930 286 aaKnown RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 PGLSO95336 258 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 METTL18O95568 372 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MLNP12872 115 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 HLA-EP13747 358 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 PSMA3P25788 255 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 SERPINA4P29622 427 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 SCNN1BP51168 640 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 SEC13P55735 322 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 RPS14P62263 151 aaKnown RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 POLR2LP62875 67 aaKnown RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 FOXK2Q01167 660 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 DSC2Q02487 901 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 CCDC15Q0P6D6 951 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MTAPQ13126 283 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MSLNQ13421 630 aaPredicted RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 PRPSAP1Q14558 356 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 KCNJ11Q14654 390 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 ZNF776Q68DI1 518 aaPredicted RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 KIAA1211LQ6NV74 962 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 GDPD4Q6W3E5 623 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 LEKR1Q6ZMV7 388 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 KBTBD6Q86V97 674 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 STK40Q8N2I9 435 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 CBARPQ8N350 705 aaPredicted RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 CHST14Q8NCH0 376 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 BBOF1Q8ND07 529 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 LRRN4Q8WUT4 740 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 LRRC45Q96CN5 670 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 PPP1R16AQ96I34 528 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MRGPRX2Q96LB1 330 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MRGPRX1Q96LB2 322 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 KRT12Q99456 494 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MLPHQ9BV36 600 aaPredicted RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 FAM126AQ9BYI3 521 aaPredicted RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 MKRN2Q9H000 416 aaKnown RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 TNKS2Q9H2K2 1166 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 KDM4CQ9H3R0 1056 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 MFSD1Q9H3U5 465 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 LRRC40Q9H9A6 602 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 ITM2CQ9NQX7 267 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 WHRNQ9P202 907 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 USP36Q9P275 1121 aaKnown RBP11.38□□□□□ -0.59
MSH5-214ENST00000468602 RSPH14Q9UHP6 348 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 FBXO4Q9UKT5 387 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 FZD4Q9ULV1 537 aa11.38□□□□□ -0.59
MSH5-214ENST00000468602 ZNF318Q5VUA4 2279 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 EFCAB8A8MWE9 144 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 DNALI1O14645 258 aaPredicted RBP11.37□□□□□ -0.59
MSH5-214ENST00000468602 TTI1O43156 1089 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 PI15O43692 258 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 LEFTY1O75610 366 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 NEBLO76041 1014 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 PDGFBP01127 241 aaPredicted RBP11.37□□□□□ -0.59
MSH5-214ENST00000468602 IFNB1P01574 187 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 ITIH2P19823 946 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 HLA-DPA1P20036 260 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 PSMB4P28070 264 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 MAGEA3P43357 314 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 CXCL12P48061 93 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 NRLP54845 237 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 MAXP61244 160 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 CDK18Q07002 472 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 C2orf54Q08AI8 447 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 TRAF2Q12933 501 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 CST6Q15828 149 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 ZNF528Q3MIS6 628 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 DNTTIP2Q5QJE6 756 aaKnown RBP11.37□□□□□ -0.59
MSH5-214ENST00000468602 ATXN7L2Q5T6C5 722 aaPredicted RBP11.37□□□□□ -0.59
MSH5-214ENST00000468602 RNASEH2BQ5TBB1 312 aaKnown RBP11.37□□□□□ -0.59
MSH5-214ENST00000468602 NAPEPLDQ6IQ20 393 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 B4GALNT4Q76KP1 1039 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 LINC00523Q86TU6 105 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 TMPRSS6Q8IU80 811 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 NAT8LQ8N9F0 302 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
MSH5-214ENST00000468602 PIP4K2CQ8TBX8 421 aa11.37□□□□□ -0.59
MSH5-214ENST00000468602 PIH1D2Q8WWB5 315 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms