RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ACOX2Q99424 681 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 FERMT1Q9BQL6 677 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MGME1Q9BQP7 344 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SPON2Q9BUD6 331 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MAK16Q9BXY0 300 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MKRN2Q9H000 416 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 EPC1Q9H2F5 836 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 KCNF1Q9H3M0 494 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SP110Q9HB58 689 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TIMMDC1Q9NPL8 285 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PRSS16Q9NQE7 514 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ITM2CQ9NQX7 267 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NDFIP2Q9NV92 336 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 GPATCH2LQ9NWQ4 482 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CACNA2D2Q9NY47 1150 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 DTLQ9NZJ0 730 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 DKK3Q9UBP4 350 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 UBA2Q9UBT2 640 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SEPT3Q9UH03 358 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 IPO11Q9UI26 975 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 DNAI1Q9UI46 699 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SLCO3A1Q9UIG8 710 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 AMFRQ9UKV5 643 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PPM1HQ9ULR3 514 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TTC7AQ9ULT0 858 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 GUCA1BQ9UMX6 200 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PCDHGA5Q9Y5G8 931 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SNX10Q9Y5X0 201 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CAPN6Q9Y6Q1 641 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 THADAQ6YHU6 1953 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 KNL1Q8NG31 2342 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TSPAN11A1L157 253 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CFAP69A5D8W1 941 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TMEM110-MUSTN1A8MSY1 372 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TTC34A8MYJ7 566 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 C1QTNF3-AMACRE9PGA6 284 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MEN1O00255 615 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MATN3O15232 486 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 DDX3YO15523 660 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 BUB1O43683 1085 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 AP1G1O43747 822 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MFSD11O43934 449 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SNAP91O60641 907 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CST8O60676 142 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 LRP3O75074 770 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SIN3BO75182 1162 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TMCC1O94876 653 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 IGSF6O95976 241 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MT-CO1P00395 513 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 EPOP01588 193 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 DNTTP04053 509 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CD48P09326 243 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PYGMP11217 842 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CCNB1P14635 433 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TCP1P17987 556 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CR2P20023 1033 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 AMPD1P23109 780 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ITGB7P26010 798 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CD6P30203 668 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 STIP1P31948 543 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CHRNA3P32297 505 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ACVRL1P37023 503 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 STK19P49842 368 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TPMTP51580 245 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CCNHP51946 323 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SEC13P55735 322 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RPL26P61254 145 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RHOAP61586 193 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 POLR2LP62875 67 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 GBE1Q04446 702 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CSTF1Q05048 431 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RAD51Q06609 339 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF235Q14590 738 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 NUMA1Q14980 2115 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PRKD1Q15139 912 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 NOMO1Q15155 1222 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RPS6KA1Q15418 735 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ELF2Q15723 593 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CST6Q15828 149 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MYLK3Q32MK0 819 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MAP7D1Q3KQU3 841 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 GON4LQ3T8J9 2241 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ATP13A4Q4VNC1 1196 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF805Q5CZA5 627 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CARD16Q5EG05 197 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ZFYVE27Q5T4F4 411 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MARC1Q5VT66 337 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PEAR1Q5VY43 1037 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ARMC3Q5W041 872 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ANO7Q6IWH7 933 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 KIAA1211LQ6NV74 962 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 DRICH1Q6PGQ1 229 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 BRAT1Q6PJG6 821 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MFSD7Q6UXD7 560 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 DPY19L3Q6ZPD9 716 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RIPOR1Q6ZS17 1223 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CCDC13Q8IYE1 715 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CCDC33Q8N5R6 958 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms