RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TMEM105Q8N8V8 129 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 EIF1ADQ8N9N8 165 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 SEMA4DQ92854 862 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 BORCS6Q96GS4 357 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MYRFLQ96LU7 910 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 LRGUKQ96M69 825 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TRIM56Q9BRZ2 755 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 GPR174Q9BXC1 333 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 NUF2Q9BZD4 464 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 PLA2G2FQ9BZM2 168 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 LHX5Q9H2C1 402 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CHRDQ9H2X0 955 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CRISPLD1Q9H336 500 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 VRTNQ9H8Y1 702 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 LRRC4CQ9HCJ2 640 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 FBXO10Q9UK96 956 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 APOBEC2Q9Y235 224 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 KRBA1A5PL33 1030 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 IRAK2O43187 625 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PI15O43692 258 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 BANF1O75531 89 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 EGFP01133 1207 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ETS1P14921 441 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 CYP11B1P15538 503 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PTPN4P29074 926 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PRKCIP41743 596 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PSMD8P48556 350 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TUBP50607 506 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 NHLH1Q02575 133 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 LMAN2Q12907 356 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 KLHL38Q2WGJ6 581 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 POM121L1PQ3SYA9 428 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 KCNT1Q5JUK3 1230 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 FAXCQ5TGI0 409 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 MBLAC2Q68D91 279 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF776Q68DI1 518 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 LAIR1Q6GTX8 287 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF572Q7Z3I7 529 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PCGF5Q86SE9 256 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 NOP9Q86U38 636 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 NDRG1Q92597 394 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TLCD1Q96CP7 247 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 CHFRQ96EP1 664 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 HIC2Q96JB3 615 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 MCEEQ96PE7 176 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 APOBEC3GQ9HC16 384 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 WHRNQ9P202 907 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 NOL3O60936 208 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 CYP17A1P05093 508 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 MX2P20592 715 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 BGNP21810 368 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TPD52P55327 224 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SLC6A3Q01959 620 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SEPT6Q14141 434 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ZCWPW2Q504Y3 356 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 HSP90AA5PQ58FG0 334 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TRIM61Q5EBN2 209 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 DENND1BQ6P3S1 775 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 LRRC6Q86X45 466 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 AHI1Q8N157 1196 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 GALNT4Q8N4A0 578 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 FAM13CQ8NE31 585 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TMEM120AQ9BXJ8 343 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TKTL2Q9H0I9 626 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 XYLT2Q9H1B5 865 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ETAA1Q9NY74 926 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SENP1Q9P0U3 644 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 HMGXB4Q9UGU5 601 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 GVINP1Q7Z2Y8 2422 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 GTPBP10A4D1E9 387 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 MAGEA13PA6NCF6 341 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 YJEFN3A6XGL0 299 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 E7ENQ6 273 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 DFFAO00273 331 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 DDX3YO15523 660 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SP9P0CG40 484 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 STARD6P59095 220 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 DAOAP59103 153 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 RHOAP61586 193 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 C11orf63Q6NUN7 778 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TRIM42Q8IWZ5 723 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ICA1LQ8NDH6 482 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 RNF217Q8TC41 542 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 TCP10LQ8TDR4 215 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 DQX1Q8TE96 717 aaKnown RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF570Q96NI8 536 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 MYOCQ99972 504 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 ACE2Q9BYF1 805 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 SLC2A11Q9BYW1 496 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 VPS11Q9H270 941 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PCMTD2Q9NV79 361 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 PARVAQ9NVD7 372 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 FBXL12Q9NXK8 326 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 XPO7Q9UIA9 1087 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms