RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 GCNT7Q6ZNI0 430 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 Q6ZSR6 202 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SRLQ86TD4 932 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SLCO6A1Q86UG4 719 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 IQCHQ86VS3 1027 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 LZTR1Q8N653 840 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 KCTD6Q8NC69 237 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SLC35G2Q8TBE7 412 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 RAB7BQ96AH8 199 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 WRAP53Q9BUR4 548 aaKnown RBP11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SCNM1Q9BWG6 230 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 C1QTNF2Q9BXJ5 285 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 CALN1Q9BXU9 219 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 CPEB1Q9BZB8 566 aaKnown RBP11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SUV39H2Q9H5I1 410 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 POM121BA6NF01 834 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 AREL1O15033 823 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 MAGEC1O60732 1142 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 MAP3K6O95382 1288 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 PI4KAP42356 2102 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 ARRB1P49407 418 aaPredicted RBP11.67□□□□□ -0.54
CDHR3-205ENST00000468143 SCNN1BP51168 640 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 ARSEP51690 589 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF542PQ5EBM4 170 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 CNGA4Q8IV77 575 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 EID2Q8N6I1 236 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 PAF1Q8N7H5 531 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 BAHD1Q8TBE0 780 aaPredicted RBP11.67□□□□□ -0.54
CDHR3-205ENST00000468143 CXorf40AQ8TE69 158 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 SAP25Q8TEE9 199 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 TSC1Q92574 1164 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 NSMCE3Q96MG7 304 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
CDHR3-205ENST00000468143 CACNA1AO00555 2505 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 A8MX80 341 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 MAFKO60675 156 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 PEX11BO96011 259 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 TNNT1P13805 278 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 EPHA8P29322 1005 aaPredicted RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 GRK6P43250 576 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 CSNK1DP48730 415 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 MAXP61244 160 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 SHC2P98077 582 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 BCL2L1Q07817 233 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 OVGP1Q12889 678 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 DPYSL3Q14195 570 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 RFTN1Q14699 578 aaPredicted RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 UGP2Q16851 508 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 ANKRD20A8PQ5CZ79 823 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 CFAP58Q5T655 872 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 PTAR1Q7Z6K3 402 aaPredicted RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 ABI3BPQ7Z7G0 1075 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 SLC22A18ASQ8N1D0 253 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 PGBD5Q8N414 524 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 TC2NQ8N9U0 490 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 PCDH19Q8TAB3 1148 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 FAM71BQ8TC56 605 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 KLF6Q99612 283 aaPredicted RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 CDC6Q99741 560 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 ERVMER34-1Q9H9K5 563 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 PCDH12Q9NPG4 1184 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 MBNL1Q9NR56 388 aaKnown RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 SEPT3Q9UH03 358 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 KLK13Q9UKR3 277 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 APOBEC2Q9Y235 224 aaKnown RBP11.66□□□□□ -0.54
CDHR3-205ENST00000468143 COQ6Q9Y2Z9 468 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 HYOU1Q9Y4L1 999 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 HS3ST3A1Q9Y663 406 aa11.66□□□□□ -0.54
CDHR3-205ENST00000468143 A6NNZ2 444 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 FPGTO14772 594 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 MFSD11O43934 449 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TM7SF2O76062 418 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 LDOC1O95751 146 aaPredicted RBP11.65□□□□□ -0.54
CDHR3-205ENST00000468143 SERPINA4P29622 427 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 RXRGP48443 463 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF75DP51815 510 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 NSUN2Q08J23 767 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF235Q14590 738 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 GRM3Q14832 879 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TMEM52BQ4KMG9 183 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TPRG1LQ5T0D9 272 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 NCBP2-AS2Q69YL0 99 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 OXR1Q8N573 874 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 ATPAF2Q8N5M1 289 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDHR3-205ENST00000468143 HCAR2Q8TDS4 363 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 CENPTQ96BT3 561 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
CDHR3-205ENST00000468143 PSKH2Q96QS6 385 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TUBGCP5Q96RT8 1024 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms