RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CKMT2P17540 419 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 ERCC2P18074 760 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 XPAP23025 273 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 DGKAP23743 735 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 ACADVLP49748 655 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 PAPOLAP51003 745 aaKnown RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 PIGHQ14442 188 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 BOLA3Q53S33 107 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 AFMIDQ63HM1 303 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 DHRS13Q6UX07 377 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 CYP4V2Q6ZWL3 525 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 SLC22A18ASQ8N1D0 253 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 LZTR1Q8N653 840 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 CELF6Q96J87 481 aaKnown RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 ZNF641Q96N77 438 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 KLF6Q99612 283 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 SLC39A8Q9C0K1 460 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 GPR27Q9NS67 375 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 PLXNB3Q9ULL4 1909 aa19.31■□□□□ 0.68
COL7A1-207ENST00000467985 ARID1BQ8NFD5 2236 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-207ENST00000467985 SPTY2D1-AS1A0A0U1RR47 76 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 POM121BA6NF01 834 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 NEMP2A6NFY4 417 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 H3BRJ5 948 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 J3KR12 359 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 RAD51BO15315 384 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 SPINT1O43278 529 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 ALPPL2P10696 532 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 HNF1BP35680 557 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 CSNK1DP48730 415 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 HNRNPKP61978 463 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL7A1-207ENST00000467985 ELP6Q0PNE2 266 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 DNAJC3Q13217 504 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 RFTN1Q14699 578 aaPredicted RBP19.3■□□□□ 0.68
COL7A1-207ENST00000467985 SLC25A45Q8N413 288 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 OR4C6Q8NH72 309 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 CXorf40AQ8TE69 158 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 CPLX3Q8WVH0 158 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 TUBGCP5Q96RT8 1024 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 CCDC86Q9H6F5 360 aaKnown RBP19.3■□□□□ 0.68
COL7A1-207ENST00000467985 DNAJC28Q9NX36 388 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 CWC15Q9P013 229 aaKnown RBP19.3■□□□□ 0.68
COL7A1-207ENST00000467985 IPO11Q9UI26 975 aaKnown RBP19.3■□□□□ 0.68
COL7A1-207ENST00000467985 GGT7Q9UJ14 662 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 ITM2BQ9Y287 266 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 GOLGA4Q13439 2230 aaKnown RBP19.3■□□□□ 0.68
COL7A1-207ENST00000467985 FAM208BQ5VWN6 2430 aa19.3■□□□□ 0.68
COL7A1-207ENST00000467985 SRRM3A6NNA2 597 aaPredicted RBP19.29■□□□□ 0.68
COL7A1-207ENST00000467985 DFFAO00273 331 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 TOR1BO14657 336 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 PALMO75781 387 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 PIAS2O75928 621 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 CAPNS1P04632 268 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 TIMP2P16035 220 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 ARL4AP40617 200 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 DPYSQ14117 519 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 DPYSL2Q16555 572 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 PROX2Q3B8N5 592 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 CFAP58Q5T655 872 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 BRAT1Q6PJG6 821 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 PARGQ86W56 976 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 NIPA2Q8N8Q9 360 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 EXOC2Q96KP1 924 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 SUV39H2Q9H5I1 410 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 ATP13A3Q9H7F0 1226 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 SP110Q9HB58 689 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 IFNKQ9P0W0 207 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 IP6K2Q9UHH9 426 aa19.29■□□□□ 0.68
COL7A1-207ENST00000467985 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL7A1-207ENST00000467985 TSPAN11A1L157 253 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 H3BM21 787 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 INSIG1O15503 277 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 SIGLEC6O43699 453 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 TM7SF2O76062 418 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 CSF2P04141 144 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 ACP1P24666 158 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 SERPINA4P29622 427 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 IL10RBQ08334 325 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 NSUN2Q08J23 767 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL7A1-207ENST00000467985 PTK2BQ14289 1009 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 FZD2Q14332 565 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 TMCO4Q5TGY1 634 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 ERAP2Q6P179 960 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 PROSER1Q86XN7 944 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 ARHGAP12Q8IWW6 846 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 PDCD7Q8N8D1 485 aaKnown RBP19.28■□□□□ 0.68
COL7A1-207ENST00000467985 NETO2Q8NC67 525 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 TEKT4Q8WW24 435 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 CENPTQ96BT3 561 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 CINPQ9BW66 212 aaPredicted RBP19.28■□□□□ 0.68
COL7A1-207ENST00000467985 THAP2Q9H0W7 228 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 UCKL1Q9NWZ5 548 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 NLGN3Q9NZ94 848 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 DKK4Q9UBT3 224 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 ACACAQ13085 2346 aa19.28■□□□□ 0.68
COL7A1-207ENST00000467985 KNTC1P50748 2209 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 A0A087X0T9 212 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 TRIM38O00635 465 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 MMP20O60882 483 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms