RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NDRG2Q9UN36 371 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 MYO15AQ9UKN7 3530 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 DNALI1O14645 258 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 TP73O15350 636 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 MMP2P08253 660 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 FDFT1P37268 417 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 HSPA9P38646 679 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 VASPP50552 380 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 NSUN2Q08J23 767 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SEMA5AQ13591 1074 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 CCINQ13939 588 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 IHHQ14623 411 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 C2orf27AQ580R0 203 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 C4orf22Q6V702 233 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF852Q6ZMS4 543 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 PRPF39Q86UA1 669 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 CHPFQ8IZ52 775 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 PCDH20Q8N6Y1 951 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 OR2AP1Q8NGE2 309 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 ARRDC2Q8TBH0 407 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SEC14L1Q92503 715 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 CPT1BQ92523 772 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 PTPRN2Q92932 1015 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 LRRC45Q96CN5 670 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 IMP4Q96G21 291 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SNF8Q96H20 258 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 NSMCE3Q96MG7 304 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 FCRL5Q96RD9 977 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 TMEM245Q9H330 911 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 NOD2Q9HC29 1040 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 HAUS2Q9NVX0 235 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 WNT16Q9UBV4 365 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SLC8A2Q9UPR5 921 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 TECTAO75443 2155 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 TCRBV7S3A2A0A539 114 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 BHMG1C9JSJ3 638 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 E7EVH7 732 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 MAN2B1O00754 1011 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 INSIG1O15503 277 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 HNRNPLP14866 589 aaKnown RBP eCLIP6.94□□□□□ -1.34e-9■□□□□ 10.4
SCAF4-204ENST00000467731 GKP32189 559 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 LMAN1P49257 510 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SNRPD1P62314 119 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 PRKCQQ04759 706 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 OLIG2Q13516 323 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 KCNJ11Q14654 390 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 HNRNPA1L2Q32P51 320 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 ANKRD22Q5VYY1 191 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 IZUMO3Q5VZ72 239 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 DPY19L3Q6ZPD9 716 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SPATA21Q7Z572 469 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 UBALD2Q8IYN6 164 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SIX5Q8N196 739 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 PDCD7Q8N8D1 485 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 KDM1BQ8NB78 822 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 OR2A12Q8NGT7 310 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 ERLEC1Q96DZ1 483 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 GDAP1L1Q96MZ0 367 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 NUDCD1Q96RS6 583 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 MLPHQ9BV36 600 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 SCUBE2Q9NQ36 999 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 GRHL1Q9NZI5 618 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 EVLQ9UI08 416 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 TPX2Q9ULW0 747 aaKnown RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 FARP1Q9Y4F1 1045 aaPredicted RBP6.94□□□□□ -1.3
SCAF4-204ENST00000467731 MYLKQ15746 1914 aa6.94□□□□□ -1.3
SCAF4-204ENST00000467731 ZDBF2Q9HCK1 2354 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TARSL2A2RTX5 802 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 RNF40O75150 1001 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PMPCBO75439 489 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TMEM63AO94886 807 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 IGSF6O95976 241 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 EPHX1P07099 455 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 SERPINF2P08697 491 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PYGBP11216 843 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PRKCHP24723 683 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 WASP42768 502 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ITGA8P53708 1063 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 CALCOCO2Q13137 446 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PRPSAP1Q14558 356 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ELF2Q15723 593 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PCSK7Q16549 785 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 CARD16Q5EG05 197 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TJAP1Q5JTD0 557 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 RNASEH2BQ5TBB1 312 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 KDELC2Q7Z4H8 507 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 RYBPQ8N488 228 aaPredicted RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 NAT8LQ8N9F0 302 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 IL17RCQ8NAC3 791 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 IFT81Q8WYA0 676 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 VOPP1Q96AW1 172 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 GDF3Q9NR23 364 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 WHRNQ9P202 907 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 HECAQ9UBI9 543 aaPredicted RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 FAM153AQ9UHL3 310 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 AAR2Q9Y312 384 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 GOLGA8MH3BSY2 632 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 USP12O75317 370 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms