RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 STIM1Q13586 685 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 AGERQ15109 404 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 TBR1Q16650 682 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 ALG11Q2TAA5 492 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 MYLK3Q32MK0 819 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 OGFOD3Q6PK18 319 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 ATG14Q6ZNE5 492 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 XYLT1Q86Y38 959 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 IRF2BP1Q8IU81 584 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 LURAP1LQ8IV03 231 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 FBXO39Q8N4B4 442 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 GPR156Q8NFN8 814 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 OR2AP1Q8NGE2 309 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 CCDC74AQ96AQ1 378 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 CRACR2AQ9BSW2 395 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 SPON2Q9BUD6 331 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 SLC13A1Q9BZW2 595 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 TRIM4Q9C037 500 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 ZYG11BQ9C0D3 744 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 B3GNT4Q9C0J1 378 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 RETREG1Q9H6L5 497 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 APPL1Q9UKG1 709 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 MFHAS1Q9Y4C4 1052 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 DOCK4Q8N1I0 1966 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 BICDL2A1A5D9 508 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 FOXN3O00409 490 aaPredicted RBP12.35□□□□□ -0.43
UBR4-211ENST00000467272 FAM87AP0C7U9 286 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 HGFP14210 728 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 PON1P27169 355 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 SULT1E1P49888 294 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 INHBCP55103 352 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 PPARDQ03181 441 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 DEUP1Q05D60 604 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 TMEM52BQ4KMG9 183 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 ESRP1Q6NXG1 681 aaKnown RBP12.35□□□□□ -0.43
UBR4-211ENST00000467272 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 TMPRSS9Q7Z410 1059 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 SLC47A2Q86VL8 602 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 SLITRK4Q8IW52 837 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 OR6K2Q8NGY2 324 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
UBR4-211ENST00000467272 OSBPL1AQ9BXW6 950 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 FOXP3Q9BZS1 431 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 TM6SF2Q9BZW4 377 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 ZDHHC6Q9H6R6 413 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 DKK3Q9UBP4 350 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 STAP1Q9ULZ2 295 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 SCN8AQ9UQD0 1980 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 DOPEY2Q9Y3R5 2298 aa12.35□□□□□ -0.43
UBR4-211ENST00000467272 TSPAN11A1L157 253 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 C9orf172C9J069 976 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 MMP20O60882 483 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 SRGAP2O75044 1071 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 POP4O95707 220 aaKnown RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 RPLP0P05388 317 aaKnown RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 UGT2B4P06133 528 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 TIMP2P16035 220 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 PNLIPP16233 465 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 ITIH2P19823 946 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 ETV5P41161 510 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 THOP1P52888 689 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 SNX16P57768 344 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 PTK2Q05397 1052 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 CLCA4Q14CN2 919 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 ELOCQ15369 112 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 WSCD2Q2TBF2 565 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 RAB6CQ53S08 254 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 USP53Q70EK8 1073 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 VPS36Q86VN1 386 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 OR6C4Q8NGE1 309 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 FUBP1Q96AE4 644 aaKnown RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 TMEM159Q96B96 161 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.436e-8■■■□□ 14.7
UBR4-211ENST00000467272 EPAS1Q99814 870 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 RAB6CQ9H0N0 254 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 LRRN3Q9H3W5 708 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 EPB41L5Q9HCM4 733 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 PLCB1Q9NQ66 1216 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 TMEM248Q9NWD8 314 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 CTNND2Q9UQB3 1225 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 HEMK1Q9Y5R4 338 aaPredicted RBP12.34□□□□□ -0.43
UBR4-211ENST00000467272 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
UBR4-211ENST00000467272 CENPEQ02224 2701 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms