RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MMP2P08253 660 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 SP9P0CG40 484 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 NFKB1P19838 968 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 CA4P22748 312 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 OXTRP30559 389 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 CNR2P34972 360 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 DRD3P35462 400 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 COILP38432 576 aaPredicted RBP16.16■□□□□ 0.18
GPC1-207ENST00000466624 P2RY2P41231 377 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 TPMTP51580 245 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 SKOR1P84550 965 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 USP39Q53GS9 565 aaKnown RBP16.16■□□□□ 0.18
GPC1-207ENST00000466624 BRAT1Q6PJG6 821 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 CCDC137Q6PK04 289 aaKnown RBP16.16■□□□□ 0.18
GPC1-207ENST00000466624 C4orf22Q6V702 233 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
GPC1-207ENST00000466624 CAMK1DQ8IU85 385 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 AADATQ8N5Z0 425 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 ARRDC3Q96B67 414 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 NSMCE3Q96MG7 304 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 KLHL32Q96NJ5 620 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 TPSD1Q9BZJ3 242 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 ZSCAN32Q9NX65 697 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 RSPH14Q9UHP6 348 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 FEZ2Q9UHY8 353 aaPredicted RBP16.16■□□□□ 0.18
GPC1-207ENST00000466624 NCKAP1Q9Y2A7 1128 aa16.16■□□□□ 0.18
GPC1-207ENST00000466624 TTC24A2A3L6 582 aaPredicted RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 C16orf96A6NNT2 1141 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 PDE2AO00408 941 aaPredicted RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 FZD6O60353 706 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 URI1O94763 535 aaPredicted RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 ACTN2P35609 894 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 CD86P42081 329 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 PXNP49023 591 aaPredicted RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 FNTBP49356 437 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 SUOXP51687 545 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 NEK3P51956 506 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 DMWDQ09019 674 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 PARP6Q2NL67 630 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 MAP7D1Q3KQU3 841 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 TTC27Q6P3X3 843 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 ARHGEF18Q6ZSZ5 1173 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 ERN2Q76MJ5 926 aaKnown RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 PARS2Q7L3T8 475 aaKnown RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 ZNF572Q7Z3I7 529 aaPredicted RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 CACUL1Q86Y37 369 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 KLHDC8BQ8IXV7 354 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 CCDC89Q8N998 374 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 ZBTB44Q8NCP5 570 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 CCDC110Q8TBZ0 833 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 GRK7Q8WTQ7 553 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 ZNF592Q92610 1267 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 SLCO2A1Q92959 643 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 RAB7BQ96AH8 199 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 SPACA7Q96KW9 195 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 RUNDC3BQ96NL0 473 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 OMDQ99983 421 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 TDRD1Q9BXT4 1180 aaKnown RBP16.15■□□□□ 0.18
GPC1-207ENST00000466624 SGK2Q9HBY8 427 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 FBXL12Q9NXK8 326 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 PCDHGA2Q9Y5H1 932 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 CEP192Q8TEP8 1941 aa16.15■□□□□ 0.18
GPC1-207ENST00000466624 IGHV1OR15-9A0A0B4J2B8 117 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 A0A1W2PP55 124 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 ESPNB1AK53 854 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 RNASEH2AO75792 299 aaKnown RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 ANXA9O76027 345 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 KCNJ1P48048 391 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 METAP1P53582 386 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 RPL26P61254 145 aaKnown RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 POLR2LP62875 67 aaKnown RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 CKAP4Q07065 602 aaKnown RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 CNTN1Q12860 1018 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 TRAF2Q12933 501 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 MPP3Q13368 585 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 IHHQ14623 411 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 CFAP58Q5T655 872 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 PIP5KL1Q5T9C9 394 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 AGBL4Q5VU57 503 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 C11orf74Q86VG3 221 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 RBM15Q96T37 977 aaKnown RBP eCLIP16.14■□□□□ 0.17
GPC1-207ENST00000466624 KDM4CQ9H3R0 1056 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 PAK5Q9P286 719 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 SERGEFQ9UGK8 458 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 PCYOX1Q9UHG3 505 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 FAM153AQ9UHL3 310 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 RPL26L1Q9UNX3 145 aaKnown RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 AAR2Q9Y312 384 aaKnown RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 ARIH1Q9Y4X5 557 aaPredicted RBP16.14■□□□□ 0.17
GPC1-207ENST00000466624 PCDHGC4Q9Y5F7 938 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 RAI2Q9Y5P3 530 aa16.14■□□□□ 0.17
GPC1-207ENST00000466624 SPAG17Q6Q759 2223 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 PLRG1O43660 514 aaKnown RBP16.13■□□□□ 0.17
GPC1-207ENST00000466624 AP1G1O43747 822 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 LILRB5O75023 590 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 PGLSO95336 258 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 IFNB1P01574 187 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 ADRB3P13945 408 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms