RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LRIG1Q96JA1 1093 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 PPP1R2P1Q96PQ5 205 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 MKRN2Q9H000 416 aaKnown RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 ZDHHC6Q9H6R6 413 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ATP13A3Q9H7F0 1226 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 FBRSQ9HAH7 460 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 EIF2B3Q9NR50 452 aaKnown RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 GRHL1Q9NZI5 618 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 UBP1Q9NZI7 540 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 IL36AQ9UHA7 158 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ASIC3Q9UHC3 531 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 FAM153AQ9UHL3 310 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 PPM1HQ9ULR3 514 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 DMDP11532 3685 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 LAMA1P25391 3075 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 DOCK9Q9BZ29 2069 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 LOC285095A0A1B0GVY8 99 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 TCRBV7S3A2A0A539 114 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 ERI2A8K979 691 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 PI15O43692 258 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 BNIP3LO60238 219 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 PMPCBO75439 489 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 LEFTY1O75610 366 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 HEXIM1O94992 359 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 PRLP01236 227 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 UGT2B4P06133 528 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 AOC1P19801 751 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 SERPINA4P29622 427 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 MAGEA9P43362 315 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 METAP1P53582 386 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 DRG2P55039 364 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 GEMP55040 296 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 WNT3AP56704 352 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 BASP1P80723 227 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 BCL2L1Q07817 233 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 OLIG2Q13516 323 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 GRM3Q14832 879 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 STARD3Q14849 445 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 TRADDQ15628 312 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 ARSIQ5FYB1 569 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 SDE2Q6IQ49 451 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 GDPD4Q6W3E5 623 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 ZNF534Q76KX8 674 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 RYBPQ8N488 228 aaPredicted RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 FLCNQ8NFG4 579 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 GRIN3AQ8TCU5 1115 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 FAM131CQ96AQ9 280 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 LRRC45Q96CN5 670 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 ERLEC1Q96DZ1 483 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 SNF8Q96H20 258 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 FEM1CQ96JP0 617 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 ZNF641Q96N77 438 aaPredicted RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 IER2Q9BTL4 223 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 OSBPL1AQ9BXW6 950 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 RAB17Q9H0T7 212 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 AAR2Q9Y312 384 aaKnown RBP11.25□□□□□ -0.61
VCP-204ENST00000466100 SNX24Q9Y343 169 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 PCDHGC4Q9Y5F7 938 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 RAI2Q9Y5P3 530 aa11.25□□□□□ -0.61
VCP-204ENST00000466100 PLXNA2O75051 1894 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 ESYT3A0FGR9 886 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 SYNCRIPO60506 623 aaKnown RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 ATG13O75143 517 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PGLSO95336 258 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PAPSS2O95340 614 aaPredicted RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 EPOP01588 193 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PRNPP04156 253 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 APRTP07741 180 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PDHA1P08559 390 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 DRD3P35462 400 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 ADCY8P40145 1251 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 CLCN5P51795 746 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 RPS14P62263 151 aaKnown RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 CDK16Q00536 496 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 SATB1Q01826 763 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 RAD51Q06609 339 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 MTAPQ13126 283 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 SPARCL1Q14515 664 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PRPSAP1Q14558 356 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 SYCP2LQ5T4T6 812 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 IZUMO3Q5VZ72 239 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 DENND5AQ6IQ26 1287 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 HIBCHQ6NVY1 386 aaPredicted RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 RANBP10Q6VN20 620 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 DSG4Q86SJ6 1040 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 MMAAQ8IVH4 418 aaKnown RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 PPIL6Q8IXY8 311 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 IPMKQ8NFU5 416 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PIH1D2Q8WWB5 315 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 ARRDC3Q96B67 414 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms