RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PMS2P3Q13401 168 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 BTG3Q14201 252 aaPredicted RBP19.92■□□□□ 0.78
SDF4-205ENST00000465727 CERCAMQ5T4B2 595 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 TSTD2Q5T7W7 516 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 UNC93AQ86WB7 457 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 ANKRD13AQ8IZ07 590 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 ZNF280CQ8ND82 737 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 TRUB1Q8WWH5 349 aaKnown RBP19.92■□□□□ 0.78
SDF4-205ENST00000465727 ABHD8Q96I13 439 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 GPR78Q96P69 363 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 GBA3Q9H227 469 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 CHRAC1Q9NRG0 131 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 CCDC167Q9P0B6 97 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 TRHDEQ9UKU6 1024 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 BBIP1A8MTZ0 92 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 CAPN15O75808 1086 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 IL10P22301 178 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 ATP5F1P24539 256 aaPredicted RBP19.91■□□□□ 0.78
SDF4-205ENST00000465727 EPHX2P34913 555 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 ATP6V0D1P61421 351 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 POU5F1BQ06416 359 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 AARS2Q5JTZ9 985 aaKnown RBP19.91■□□□□ 0.78
SDF4-205ENST00000465727 TBCELQ5QJ74 424 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 GPR107Q5VW38 600 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 EEPD1Q7L9B9 569 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 PCYOX1LQ8NBM8 494 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 PDPRQ8NCN5 879 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 CCDC126Q96EE4 140 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 BRD8Q9H0E9 1235 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 MTF2Q9Y483 593 aaPredicted RBP19.91■□□□□ 0.78
SDF4-205ENST00000465727 A0A1W2PPW3 197 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 TRIM43BA6NCK2 446 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 SAC3D1A6NKF1 404 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 KCNK1O00180 336 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 GPC4O75487 556 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 STMN1P16949 149 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 LRPAP1P30533 357 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 GALNT2Q10471 571 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 NANOGP8Q6NSW7 305 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 PRMT9Q6P2P2 845 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 CNTN4Q8IWV2 1026 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 MRPL45Q9BRJ2 306 aaKnown RBP19.91■□□□□ 0.78
SDF4-205ENST00000465727 GPATCH1Q9BRR8 931 aaKnown RBP19.91■□□□□ 0.78
SDF4-205ENST00000465727 POMKQ9H5K3 350 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 GID8Q9NWU2 228 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 ZSWIM8A7E2V4 1837 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 CITO14578 2027 aa19.91■□□□□ 0.78
SDF4-205ENST00000465727 DHRS12A0PJE2 317 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 K7EPI3 171 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 DCLK1O15075 740 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 SULT1C4O75897 302 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 IQCF3P0C7M6 154 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 SAT1P21673 171 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 EDNRBP24530 442 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 FASP25445 335 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 HALP42357 657 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 SULT1E1P49888 294 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 SLC7A2P52569 658 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 BNIP2Q12982 314 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 ATP6AP1Q15904 470 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 FGD3Q5JSP0 725 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 TMTC4Q5T4D3 741 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 ANKRD26P1Q6NSI1 321 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 GADL1Q6ZQY3 521 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 EPHX4Q8IUS5 362 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 ZNF513Q8N8E2 541 aaPredicted RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 SHCBP1Q8NEM2 672 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 CENPNQ96H22 339 aaPredicted RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 FEM1CQ96JP0 617 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 MPHOSPH6Q99547 160 aaKnown RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 C1orf50Q9BV19 199 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 KIFC1Q9BW19 673 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 POLR1BQ9H9Y6 1135 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 ZNF638Q14966 1978 aaKnown RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 A0A087X1B8 175 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 RNF103-CHMP3A0A140T963 221 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 RASAL1O95294 804 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 GJB1P08034 283 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 FCGR1AP12314 374 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 ATP6V1B2P21281 511 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 CDH3P22223 829 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 PSMA4P25789 261 aaKnown RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 RPL10P27635 214 aaKnown RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 TMBIM6P55061 237 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 GALNT1Q10472 559 aaPredicted RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 CDH17Q12864 832 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 RGS21Q2M5E4 152 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 CNSTQ6PJW8 725 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 CATSPERGQ6ZRH7 1159 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 SPRED1Q7Z699 444 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 ZNF668Q96K58 619 aaPredicted RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 HSFY1Q96LI6 401 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 VAT1Q99536 393 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 HOPXQ9BPY8 73 aaPredicted RBP19.9■□□□□ 0.78
SDF4-205ENST00000465727 NEURL2Q9BR09 285 aa19.9■□□□□ 0.78
SDF4-205ENST00000465727 C19orf81C9J6K1 198 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 EEF2KO00418 725 aaKnown RBP19.89■□□□□ 0.77
SDF4-205ENST00000465727 E2F6O75461 281 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 FUCA1P04066 466 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 MYL3P08590 195 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms