RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 COQ10BQ9H8M1 238 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 CXorf21Q9HAI6 301 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 HMG20AQ9NP66 347 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 NGRNQ9NPE2 291 aaKnown RBP7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 ARHGEF38Q9NXL2 777 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 CROTQ9UKG9 612 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 TRHDEQ9UKU6 1024 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 SMCHD1A6NHR9 2005 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 KAT6AQ92794 2004 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 PSME4Q14997 1843 aa7.27□□□□□ -1.25
CLSTN1-204ENST00000464286 FER1L6Q2WGJ9 1857 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TMEM150BA6NC51 233 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TMEM247A6NEH6 219 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 H0YAE9 185 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 M0R082 166 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TNPO2O14787 897 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A9O60656 530 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CNOT3O75175 753 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 VPS4BO75351 444 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 MAFO75444 373 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 KATNA1O75449 491 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 PIAS1O75925 651 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 PIGNO95427 931 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 METTL18O95568 372 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 BCL10O95999 233 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ALBP02768 609 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 PRKCBP05771 671 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 SNRPB2P08579 225 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 KRT19P08727 400 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TFEBP19484 476 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CCNA2P20248 432 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 JAK1P23458 1154 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 MAP4P27816 1152 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TKTP29401 623 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 WEE1P30291 646 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ADH7P40394 386 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GRIA4P48058 902 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ENTPD1P49961 510 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ERFP50548 548 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 RBP5P82980 135 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 INCA1Q0VD86 236 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GALNT1Q10472 559 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 KRR1Q13601 381 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TRIM16LQ309B1 348 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 LSM12Q3MHD2 195 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 SLC9B1Q4ZJI4 515 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CCNYL2Q5T2Q4 361 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CES4AQ5XG92 561 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 KCNT2Q6UVM3 1135 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 NPNTQ6UXI9 565 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 PRR23CQ6ZRP0 262 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 C8orf86Q6ZUL3 223 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 STRADAQ7RTN6 431 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 SLC22A9Q8IVM8 553 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 HERC6Q8IVU3 1022 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CPXCR1Q8N123 301 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ZNF786Q8N393 782 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 FIBCD1Q8N539 461 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 DCLK2Q8N568 766 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 COLGALT1Q8NBJ5 622 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ZNF417Q8TAU3 575 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TSPEARQ8WU66 669 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 BHMTQ93088 406 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 C12orf43Q96C57 262 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 HSPBAP1Q96EW2 488 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TMA16Q96EY4 203 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TSPAN17Q96FV3 270 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CENPNQ96H22 339 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 FEM1CQ96JP0 617 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 SCYL1Q96KG9 808 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 RDH12Q96NR8 316 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 AGAP3Q96P47 875 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 RANBP9Q96S59 729 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ZNF587Q96SQ5 575 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CYP2S1Q96SQ9 504 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CGREF1Q99674 301 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ACO2Q99798 780 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GPATCH1Q9BRR8 931 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 SNRNP25Q9BV90 132 aaKnown RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GATA5Q9BWX5 397 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 XYLT2Q9H1B5 865 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 RHOJQ9H4E5 214 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TASP1Q9H6P5 420 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A7Q9HAW7 530 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A10Q9HAW8 530 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A8Q9HAW9 530 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 AS3MTQ9HBK9 375 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GBA2Q9HCG7 927 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ANKHQ9HCJ1 492 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 PRDM6Q9NQX0 595 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 RNF146Q9NTX7 359 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 CCM2LQ9NUG4 571 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 TMEM45AQ9NWC5 275 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GGA3Q9NZ52 723 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 GMIPQ9P107 970 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 ACOT9Q9Y305 439 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 NDUFAF1Q9Y375 327 aa7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 MTF2Q9Y483 593 aaPredicted RBP7.26□□□□□ -1.25
CLSTN1-204ENST00000464286 SNX13Q9Y5W8 968 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms