RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SDR16C5Q8N3Y7 309 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 RYBPQ8N488 228 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-210ENST00000464078 NDFIP2Q9NV92 336 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 TMEM248Q9NWD8 314 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 OR12D3Q9UGF7 316 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 ZSCAN5CA6NGD5 496 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-210ENST00000464078 D6RAR5 112 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 TMX2-CTNND1H3BSU7 103 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 CASC3O15234 703 aaKnown RBP17.51■□□□□ 0.39
HMGN1-210ENST00000464078 TM7SF2O76062 418 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 ADRA1BP35368 520 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 MTIF2P46199 727 aaKnown RBP17.51■□□□□ 0.39
HMGN1-210ENST00000464078 PEX5P50542 639 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 PPARDQ03181 441 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 C1orf61Q13536 156 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 MYLK3Q32MK0 819 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 FOXR1Q6PIV2 292 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 CREBRFQ8IUR6 639 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 TP53I13Q8NBR0 393 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-210ENST00000464078 GDAP1L1Q96MZ0 367 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 KLHL32Q96NJ5 620 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 DKK3Q9UBP4 350 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
HMGN1-210ENST00000464078 LRRK2Q5S007 2527 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 GOLGA8SH3BPF8 625 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 SLC28A2O43868 658 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 RAMP2O60895 175 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 ALPIP09923 528 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 PRKCSHP14314 528 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-210ENST00000464078 EIF4A3P38919 411 aaKnown RBP17.5■□□□□ 0.39
HMGN1-210ENST00000464078 SUOXP51687 545 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 HK3P52790 923 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 NOMO3P69849 1222 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 ELOCQ15369 112 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 C2CD6Q53TS8 623 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 FAXCQ5TGI0 409 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 XKR5Q6UX68 686 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 GDPD4Q6W3E5 623 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 B3GNT8Q7Z7M8 397 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 KYQ8NBH2 561 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 SCG3Q8WXD2 468 aaKnown RBP17.5■□□□□ 0.39
HMGN1-210ENST00000464078 CASKIN2Q8WXE0 1202 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 EPAS1Q99814 870 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 MBNL1Q9NR56 388 aaKnown RBP17.5■□□□□ 0.39
HMGN1-210ENST00000464078 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.5■□□□□ 0.39
HMGN1-210ENST00000464078 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 MFHAS1Q9Y4C4 1052 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 LRRK1Q38SD2 2015 aa17.5■□□□□ 0.39
HMGN1-210ENST00000464078 TMEM110-MUSTN1A8MSY1 372 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 MMP20O60882 483 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 LRIG2O94898 1065 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 WISP1O95388 367 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 CELA2BP08218 269 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-210ENST00000464078 SLC5A2P31639 672 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 CCKBRP32239 447 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 ATP11AP98196 1134 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 KCNC4Q03721 635 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 RAPGEF1Q13905 1077 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 ATXN7L2Q5T6C5 722 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-210ENST00000464078 RAB11FIP2Q7L804 512 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 TTC7BQ86TV6 843 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 NOP9Q86U38 636 aaKnown RBP17.49■□□□□ 0.39
HMGN1-210ENST00000464078 EMC1Q8N766 993 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 OR6C4Q8NGE1 309 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 PCDH19Q8TAB3 1148 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 EPS8L1Q8TE68 723 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 CXorf40AQ8TE69 158 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 CCDC74AQ96AQ1 378 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 GFM1Q96RP9 751 aaKnown RBP17.49■□□□□ 0.39
HMGN1-210ENST00000464078 NAA15Q9BXJ9 866 aaKnown RBP17.49■□□□□ 0.39
HMGN1-210ENST00000464078 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 STRADBQ9C0K7 418 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 NDST4Q9H3R1 872 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 DNAI1Q9UI46 699 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 RABGEF1Q9UJ41 708 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 FHOD1Q9Y613 1164 aa17.49■□□□□ 0.39
HMGN1-210ENST00000464078 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 EFSO43281 561 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 KDELR3O43731 214 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 NOBOXO60393 691 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-210ENST00000464078 TMCC1O94876 653 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 ITGB2P05107 769 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 UGT1A5P35504 534 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 PTPN9P43378 593 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 RAD51Q06609 339 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 AGERQ15109 404 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 IRF4Q15306 451 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 ALG11Q2TAA5 492 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 KLHL40Q2TBA0 621 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 LRRC73Q5JTD7 316 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 MIIPQ5JXC2 388 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 TAF3Q5VWG9 929 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 RWDD4Q6NW29 188 aaKnown RBP17.48■□□□□ 0.39
HMGN1-210ENST00000464078 STRADAQ7RTN6 431 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 FAM114A1Q8IWE2 563 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms