RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 BAHD1Q8TBE0 780 aaPredicted RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 RAB7BQ96AH8 199 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 SKA1Q96BD8 255 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 BMFQ96LC9 184 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 KLF6Q99612 283 aaPredicted RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 CALN1Q9BXU9 219 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 GDF3Q9NR23 364 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 TFR2Q9UP52 801 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 POM121BA6NF01 834 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 TSPAN6O43657 245 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 PCDHGA12O60330 932 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 MAP3K6O95382 1288 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 CCT8P50990 548 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 FOXC1Q12948 553 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 BNIP3Q12983 259 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 KIAA1161Q6NSJ0 714 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 SRLQ86TD4 932 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 IQCHQ86VS3 1027 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 PGBD5Q8N414 524 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 KCTD6Q8NC69 237 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 OR13H1Q8NG92 308 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 RHBDD1Q8TEB9 315 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 C1QTNF2Q9BXJ5 285 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 SUV39H2Q9H5I1 410 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 DKK3Q9UBP4 350 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 TPRP12270 2363 aaKnown RBP13.11□□□□□ -0.31
XRN1-203ENST00000463916 ACACBO00763 2458 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 NEMP1O14524 444 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 MTA2O94776 668 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 THEGLP0DJG4 465 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 MAN1A1P33908 653 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 SEMG2Q02383 582 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 LBRQ14739 615 aaKnown RBP13.11□□□□□ -0.31
XRN1-203ENST00000463916 SLC45A4Q5BKX6 768 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 ANKRD20A8PQ5CZ79 823 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 NCBP2-AS2Q69YL0 99 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 SLC22A18ASQ8N1D0 253 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 PNPLA1Q8N8W4 532 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 LRRN4Q8WUT4 740 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 KLHDC7BQ96G42 594 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 MRFAP1L1Q96HT8 127 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 PSKH2Q96QS6 385 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 CINPQ9BW66 212 aaPredicted RBP13.11□□□□□ -0.31
XRN1-203ENST00000463916 ERVMER34-1Q9H9K5 563 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 RCOR3Q9P2K3 495 aaPredicted RBP13.11□□□□□ -0.31
XRN1-203ENST00000463916 HYOU1Q9Y4L1 999 aa13.11□□□□□ -0.31
XRN1-203ENST00000463916 FLRT2O43155 660 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 MFSD11O43934 449 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 DFNA5O60443 496 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 MMP20O60882 483 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 PRKCGP05129 697 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 AKT2P31751 481 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 CSNK1DP48730 415 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 SCNN1BP51168 640 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 NSUN2Q08J23 767 aaKnown RBP eCLIP13.1□□□□□ -0.31
XRN1-203ENST00000463916 OVGP1Q12889 678 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
XRN1-203ENST00000463916 UGP2Q16851 508 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 ABI3BPQ7Z7G0 1075 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 SLCO6A1Q86UG4 719 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 ZNF599Q96NL3 588 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 WRAP53Q9BUR4 548 aaKnown RBP13.1□□□□□ -0.31
XRN1-203ENST00000463916 TOR4AQ9NXH8 423 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 PCDHB9Q9Y5E1 797 aa13.1□□□□□ -0.31
XRN1-203ENST00000463916 TSPAN11A1L157 253 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 RXRGP48443 463 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 SHC2P98077 582 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 SUZ12Q15022 739 aaKnown RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 Q6ZSR6 202 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ZNF641Q96N77 438 aaPredicted RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ANGPTL2Q9UKU9 493 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 TRAFD1O14545 582 aaPredicted RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 LCA5LO95447 670 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 KRT7P08729 469 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 CR2P20023 1033 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 KDELR1P24390 212 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 EPHA8P29322 1005 aaPredicted RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 SERPINB6P35237 376 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ARHGAP25P42331 645 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 MAXP61244 160 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 GBE1Q04446 702 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 SLC10A2Q12908 348 aaPredicted RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 SGCGQ13326 291 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 PDK2Q15119 407 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 TCEAL1Q15170 157 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 TPRG1LQ5T0D9 272 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 KANSL1Q7Z3B3 1105 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 GLRX5Q86SX6 157 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms