RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PRAMEF33A0A0G2JMD5 474 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 CXorf51AA0A1B0GTR3 108 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 BICDL2A1A5D9 508 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 I6L893 689 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 PRAMEF10O60809 474 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 MMP20O60882 483 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 POP4O95707 220 aaKnown RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 UGT2B4P06133 528 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 TFE3P19532 575 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 ITIH1P19827 911 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 HTR1BP28222 390 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 ETFBP38117 255 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 PEX5P50542 639 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 GEMIN4P57678 1058 aaKnown RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 SNRPD1P62314 119 aaKnown RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 CYP4F2P78329 520 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 MORC3Q14149 939 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 ARHGAP44Q17R89 818 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 OTUD1Q5VV17 481 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 KLHL10Q6JEL2 608 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 RD3Q7Z3Z2 195 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 ZFAND4Q86XD8 727 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 FMR1NBQ8N0W7 255 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 Q8N9G6 341 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 C1orf131Q8NDD1 294 aaKnown RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 OR6K2Q8NGY2 324 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 TSACCQ96A04 125 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 PGAP3Q96FM1 320 aaPredicted RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 KLHL32Q96NJ5 620 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 CMKLR1Q99788 373 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 EPAS1Q99814 870 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 MBNL1Q9NR56 388 aaKnown RBP14.67□□□□□ -0.06
SMC1A-204ENST00000463684 HPCAL4Q9UM19 191 aa14.67□□□□□ -0.06
SMC1A-204ENST00000463684 A0A1W2PQC6 194 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 GOLGA6L4A6NEF3 574 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 BECN2A8MW95 431 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 AGRPO00253 132 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 AREL1O15033 823 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 RASGRP1O95267 797 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
SMC1A-204ENST00000463684 CD82P27701 267 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 MAPK10P53779 464 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 PTK2Q05397 1052 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 TCEA2Q15560 299 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 KLHL40Q2TBA0 621 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 MYLK3Q32MK0 819 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 SLC25A52Q3SY17 297 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 TMEM164Q5U3C3 297 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 TTI2Q6NXR4 508 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 GJB7Q6PEY0 223 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 ENPP7Q6UWV6 458 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 CCNJLQ8IV13 435 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 DRC7Q8IY82 874 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 OR2AP1Q8NGE2 309 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 ATL2Q8NHH9 583 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 USP7Q93009 1102 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 NT5C3BQ969T7 300 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 HAPLN3Q96S86 360 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 TBCBQ99426 244 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 ADNPQ9H2P0 1102 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 TMPRSS4Q9NRS4 437 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 AKAP7Q9P0M2 348 aaPredicted RBP14.66□□□□□ -0.06
SMC1A-204ENST00000463684 ZDHHC9Q9Y397 364 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 ACTL7AQ9Y615 435 aa14.66□□□□□ -0.06
SMC1A-204ENST00000463684 CD160O95971 181 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 GSRP00390 522 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 GP1BBP13224 206 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 GLB1P16278 677 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 SRP54P61011 504 aaKnown RBP14.65□□□□□ -0.06
SMC1A-204ENST00000463684 RAD51Q06609 339 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 ZFP36L1Q07352 338 aaKnown RBP14.65□□□□□ -0.06
SMC1A-204ENST00000463684 CLCA4Q14CN2 919 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 LRRC14Q15048 493 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 ALG11Q2TAA5 492 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 PTPN20Q4JDL3 420 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 GDPD4Q6W3E5 623 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 DTX1Q86Y01 620 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 PTRH1Q86Y79 214 aaKnown RBP14.65□□□□□ -0.06
SMC1A-204ENST00000463684 TP53I13Q8NBR0 393 aaPredicted RBP14.65□□□□□ -0.06
SMC1A-204ENST00000463684 NELFBQ8WX92 580 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 FOXJ2Q9P0K8 574 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 APPL1Q9UKG1 709 aa14.65□□□□□ -0.06
SMC1A-204ENST00000463684 TNFP01375 233 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 XPAP23025 273 aaPredicted RBP14.64□□□□□ -0.07
SMC1A-204ENST00000463684 ACVRL1P37023 503 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 MARSP56192 900 aaKnown RBP14.64□□□□□ -0.07
SMC1A-204ENST00000463684 ARHGEF7Q14155 803 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 IRF4Q15306 451 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 LRRC73Q5JTD7 316 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 PHF19Q5T6S3 580 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 BORAQ6PGQ7 559 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 TRIM65Q6PJ69 517 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 FOXR2Q6PJQ5 311 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 GPR156Q8NFN8 814 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 HTR3CQ8WXA8 447 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 ARHGEF2Q92974 986 aaKnown RBP14.64□□□□□ -0.07
SMC1A-204ENST00000463684 CRACR2AQ9BSW2 395 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms