RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MROH6A6NGR9 719 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 G3V2L1 256 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CBX4O00257 560 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 KDELR3O43731 214 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 SNAP91O60641 907 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CBX6O95503 412 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 RHOCP08134 193 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 T-ENOLP0DO92 83 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 GJA1P17302 382 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 SERPINB3P29508 390 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 ARFIP2P53365 341 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 OXCT1P55809 520 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CDK18Q07002 472 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 STX3Q13277 289 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 ZNF177Q13360 481 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 THOC5Q13769 683 aaKnown RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 RNF219Q5W0B1 726 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 NEPROQ6NW34 567 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 RAPH1Q70E73 1250 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TBC1D1Q86TI0 1168 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 TTC7BQ86TV6 843 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TMEM151AQ8N4L1 468 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 WFDC5Q8TCV5 224 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 SUDS3Q9H7L9 328 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 HEY2Q9UBP5 337 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 FBXO5Q9UKT4 447 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TBC1D30Q9Y2I9 924 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CHD9Q3L8U1 2897 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 A0A1B0GVM2 712 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 TCAF2A6NFQ2 919 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 SIN3BO75182 1162 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 RASSF9O75901 435 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 DCTN3O75935 186 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 CD160O95971 181 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 MPOP05164 745 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 SBK3P0C264 359 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 MZF1P28698 734 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 SETDB1Q15047 1291 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 CYTH1Q15438 398 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 CTC1Q2NKJ3 1217 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 RBM20Q5T481 1227 aaKnown RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 ALG1LQ6GMV1 187 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 NAPRTQ6XQN6 538 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 PTAR1Q7Z6K3 402 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 TRIM42Q8IWZ5 723 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 CENPLQ8N0S6 344 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 CNPY4Q8N129 248 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 KLHL23Q8NBE8 558 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 ZNF398Q8TD17 642 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 BLOC1S5Q8TDH9 187 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 ZNF599Q96NL3 588 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 TMEM237Q96Q45 408 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 TRIB3Q96RU7 358 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 RANBP9Q96S59 729 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 NDNQ99608 321 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 NSMCE4AQ9NXX6 385 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 MARCH4Q9P2E8 410 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 UBA2Q9UBT2 640 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 MTF2Q9Y483 593 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 CPQQ9Y646 472 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.92□□□□□ -0.34
VAPB-203ENST00000463370 FAM95CA0A1B0GW59 222 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 ILVBLA1L0T0 632 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 TK2O00142 265 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 TBL1XO60907 577 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 UNC5CO95185 931 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 C1RP00736 705 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 PAMP19021 973 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 GABRR2P28476 465 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 GLRBP48167 497 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 SCNN1BP51168 640 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 ARF5P84085 180 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 DLG1Q12959 904 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 CHST9Q7L1S5 443 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 NECAB2Q7Z6G3 386 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 CLNKQ7Z7G1 428 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 PPP1R14CQ8TAE6 165 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 SH3RF2Q8TEC5 729 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 KCTD4Q8WVF5 259 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 HDAC10Q969S8 669 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 IFT43Q96FT9 208 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 MUC3BQ9H195 1237 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 HAO1Q9UJM8 370 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 STOML2Q9UJZ1 356 aa12.92□□□□□ -0.34
VAPB-203ENST00000463370 LCHNA4D1U4 455 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CTSAP10619 480 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CPA3P15088 417 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 HDCP19113 662 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 PPM1AP35813 382 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CD151P48509 253 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SLC1A6P48664 564 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 AQP5P55064 265 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms