RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 PIGNO95427 931 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 IGSF6O95976 241 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 CSF2P04141 144 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 CDK4P11802 303 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 MIPP30301 263 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 IGFALSP35858 605 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 PAPOLAP51003 745 aaKnown RBP16.93■□□□□ 0.3
CHKB-202ENST00000463053 PFN3P60673 137 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 INSM1Q01101 510 aaPredicted RBP16.93■□□□□ 0.3
CHKB-202ENST00000463053 EIF2B5Q13144 721 aaKnown RBP16.93■□□□□ 0.3
CHKB-202ENST00000463053 ILKQ13418 452 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 FAM174AQ8TBP5 190 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 HNRNPLLQ8WVV9 542 aaKnown RBP16.93■□□□□ 0.3
CHKB-202ENST00000463053 MBNL1Q9NR56 388 aaKnown RBP16.93■□□□□ 0.3
CHKB-202ENST00000463053 DKK3Q9UBP4 350 aa16.93■□□□□ 0.3
CHKB-202ENST00000463053 K7ESM1 405 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 EEF2KO00418 725 aaKnown RBP16.92■□□□□ 0.3
CHKB-202ENST00000463053 FPGTO14772 594 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 SCAMP1O15126 338 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 PRAMEF11O60813 436 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 GZMAP12544 262 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 RABIFP47224 123 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 RGRP47804 291 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 NDST2P52849 883 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 PDE1CQ14123 709 aaPredicted RBP16.92■□□□□ 0.3
CHKB-202ENST00000463053 COL28A1Q2UY09 1125 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 FILIP1LQ4L180 1135 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 ERMARDQ5T6L9 678 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 AFMIDQ63HM1 303 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 ARHGAP36Q6ZRI8 547 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 ZSCAN30Q86W11 494 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 ZSWIM9Q86XI8 627 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 ARHGAP12Q8IWW6 846 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 TP53INP2Q8IXH6 220 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 RFFLQ8WZ73 363 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 APOLD1Q96LR9 279 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 NSMCE3Q96MG7 304 aa16.92■□□□□ 0.3
CHKB-202ENST00000463053 CPEB1Q9BZB8 566 aaKnown RBP16.92■□□□□ 0.3
CHKB-202ENST00000463053 TCEAL2Q9H3H9 227 aaPredicted RBP16.92■□□□□ 0.3
CHKB-202ENST00000463053 UBA2Q9UBT2 640 aaPredicted RBP16.92■□□□□ 0.3
CHKB-202ENST00000463053 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
CHKB-202ENST00000463053 LRCH4O75427 683 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 CKMT1AP12532 417 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 NME1P15531 152 aaKnown RBP16.91■□□□□ 0.3
CHKB-202ENST00000463053 ERCC2P18074 760 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 HTR7P34969 479 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 HNRNPKP61978 463 aaKnown RBP eCLIP16.91■□□□□ 0.32e-21■■■■■ 55.9
CHKB-202ENST00000463053 DAB2P98082 770 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 RAD51Q06609 339 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 KLHL30Q0D2K2 578 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 PPP1R2P3Q6NXS1 205 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 NPWQ8N729 165 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 TP53I13Q8NBR0 393 aaPredicted RBP16.91■□□□□ 0.3
CHKB-202ENST00000463053 DENND6BQ8NEG7 585 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 WRAP53Q9BUR4 548 aaKnown RBP16.91■□□□□ 0.3
CHKB-202ENST00000463053 NLGN3Q9NZ94 848 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 IPO11Q9UI26 975 aaKnown RBP16.91■□□□□ 0.3
CHKB-202ENST00000463053 COQ6Q9Y2Z9 468 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 LRRK1Q38SD2 2015 aa16.91■□□□□ 0.3
CHKB-202ENST00000463053 TM7SF2O76062 418 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 PRKCGP05129 697 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 TCF4P15884 667 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 IL1R2P27930 398 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 HNF1BP35680 557 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 PBX1P40424 430 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 SEMG2Q02383 582 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 TMEM52BQ4KMG9 183 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 HGSNATQ68CP4 663 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 RFX8Q6ZV50 586 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 NYAP1Q6ZVC0 841 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 PARGQ86W56 976 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 RBFAQ8N0V3 343 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 CACTIN-AS1Q8N1I8 211 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 TSEN2Q8NCE0 465 aaKnown RBP16.9■□□□□ 0.3
CHKB-202ENST00000463053 ZNF548Q8NEK5 533 aaPredicted RBP16.9■□□□□ 0.3
CHKB-202ENST00000463053 FNIP1Q8TF40 1166 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 ZNF653Q96CK0 615 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 ISCUQ9H1K1 167 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 SUV39H2Q9H5I1 410 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 CBX8Q9HC52 389 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 CWC15Q9P013 229 aaKnown RBP16.9■□□□□ 0.3
CHKB-202ENST00000463053 MYO1AQ9UBC5 1043 aa16.9■□□□□ 0.3
CHKB-202ENST00000463053 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 TLX3O43711 291 aaPredicted RBP16.89■□□□□ 0.29
CHKB-202ENST00000463053 MT-CO3P00414 261 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 JUNDP17535 347 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 RTP5Q14D33 572 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 PPP6R3Q5H9R7 873 aaPredicted RBP16.89■□□□□ 0.29
CHKB-202ENST00000463053 LUZP1Q86V48 1076 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 CAMK1DQ8IU85 385 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 DCBLD1Q8N8Z6 715 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 FAM181AQ8N9Y4 354 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 CXorf40AQ8TE69 158 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 ARHGEF26Q96DR7 871 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 PCDH12Q9NPG4 1184 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 CLCA2Q9UQC9 943 aa16.89■□□□□ 0.29
CHKB-202ENST00000463053 RP1P56715 2156 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms