RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RFX8Q6ZV50 586 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 DENND6BQ8NEG7 585 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 OR4C6Q8NH72 309 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 SLC39A8Q9C0K1 460 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 CAAP1Q9H8G2 361 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 MRPL47Q9HD33 250 aaKnown RBP19.18■□□□□ 0.66
VARS-220ENST00000461874 DKK4Q9UBT3 224 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 SPTY2D1-AS1A0A0U1RR47 76 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 A0A1W2PQJ5 194 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 ARHGAP42A6NI28 874 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 DAPK3O43293 454 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 LRCH4O75427 683 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 JUPP14923 745 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 ACP1P24666 158 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 PAPOLAP51003 745 aaKnown RBP19.17■□□□□ 0.66
VARS-220ENST00000461874 ZNF542PQ5EBM4 170 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 PPP6R3Q5H9R7 873 aaPredicted RBP19.17■□□□□ 0.66
VARS-220ENST00000461874 LRRC73Q5JTD7 316 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 HGSNATQ68CP4 663 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 PDCD7Q8N8D1 485 aaKnown RBP19.17■□□□□ 0.66
VARS-220ENST00000461874 HCAR2Q8TDS4 363 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 SYN2Q92777 582 aaPredicted RBP19.17■□□□□ 0.66
VARS-220ENST00000461874 CENPTQ96BT3 561 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 EXOC2Q96KP1 924 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 NCAPGQ9BPX3 1015 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 DNAJC28Q9NX36 388 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 MYO1AQ9UBC5 1043 aa19.17■□□□□ 0.66
VARS-220ENST00000461874 BZW2Q9Y6E2 419 aaKnown RBP19.17■□□□□ 0.66
VARS-220ENST00000461874 DSPP15924 2871 aaKnown RBP19.17■□□□□ 0.66
VARS-220ENST00000461874 FFAR2O15552 330 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 MMP20O60882 483 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 PIGNO95427 931 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 CSF2P04141 144 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 GIMD1P0DJR0 217 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 ERCC2P18074 760 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 ITIH2P19823 946 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 HCAR3P49019 387 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 SUOXP51687 545 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 ZNF135P52742 658 aaPredicted RBP19.16■□□□□ 0.66
VARS-220ENST00000461874 CLDN6P56747 220 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 UBASH3AP57075 661 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 PFN3P60673 137 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 HNRNPKP61978 463 aaKnown RBP eCLIP19.16■□□□□ 0.66
VARS-220ENST00000461874 GRM3Q14832 879 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 HS1BP3Q53T59 392 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 PARGQ86W56 976 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 ARHGAP12Q8IWW6 846 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 CXorf40AQ8TE69 158 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 SUV39H2Q9H5I1 410 aa19.16■□□□□ 0.66
VARS-220ENST00000461874 IPO11Q9UI26 975 aaKnown RBP19.16■□□□□ 0.66
VARS-220ENST00000461874 LAMA5O15230 3695 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 TSPAN11A1L157 253 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 SCAMP1O15126 338 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 TM7SF2O76062 418 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 NME1P15531 152 aaKnown RBP19.15■□□□□ 0.66
VARS-220ENST00000461874 PCK1P35558 622 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 HNF1BP35680 557 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 CYP4F3Q08477 520 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 PDE1CQ14123 709 aaPredicted RBP19.15■□□□□ 0.66
VARS-220ENST00000461874 ACAP1Q15027 740 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 TDRD12Q587J7 1177 aaKnown RBP19.15■□□□□ 0.66
VARS-220ENST00000461874 TPRG1LQ5T0D9 272 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 HES3Q5TGS1 186 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 ZNF641Q96N77 438 aaPredicted RBP19.15■□□□□ 0.66
VARS-220ENST00000461874 NLGN3Q9NZ94 848 aa19.15■□□□□ 0.66
VARS-220ENST00000461874 CWC15Q9P013 229 aaKnown RBP19.15■□□□□ 0.66
VARS-220ENST00000461874 NEMP2A6NFY4 417 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 BUB1BO60566 1050 aaPredicted RBP19.14■□□□□ 0.65
VARS-220ENST00000461874 PALMO75781 387 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 ALPPL2P10696 532 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 XPAP23025 273 aaPredicted RBP19.14■□□□□ 0.65
VARS-220ENST00000461874 IL1R2P27930 398 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 CSNK1DP48730 415 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 ZBED6P86452 979 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 DAB2P98082 770 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 DPYSQ14117 519 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 UGP2Q16851 508 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 TMEM52BQ4KMG9 183 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 KDM7AQ6ZMT4 941 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 VPS36Q86VN1 386 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 NPWQ8N729 165 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 RFFLQ8WZ73 363 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.14■□□□□ 0.65
VARS-220ENST00000461874 WRAP53Q9BUR4 548 aaKnown RBP19.14■□□□□ 0.65
VARS-220ENST00000461874 C1QTNF7Q9BXJ2 289 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 ZWILCHQ9H900 591 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 KLF15Q9UIH9 416 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 RALYQ9UKM9 306 aaKnown RBP19.14■□□□□ 0.65
VARS-220ENST00000461874 CAPN11Q9UMQ6 739 aa19.14■□□□□ 0.65
VARS-220ENST00000461874 CELSR3Q9NYQ7 3312 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 URB1O60287 2271 aaKnown RBP19.13■□□□□ 0.65
VARS-220ENST00000461874 H3BM21 787 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 DFFAO00273 331 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 SERPING1P05155 500 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 CKMT1AP12532 417 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 IGFALSP35858 605 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 RGRP47804 291 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 E2F1Q01094 437 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 ELP6Q0PNE2 266 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 EIF2B5Q13144 721 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms