RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 UVRAGQ9P2Y5 699 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 VPS51Q9UID3 782 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 PRAMEF26H0Y7S4 382 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 SNAP91O60641 907 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 USP12O75317 370 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 RHOCP08134 193 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 SRCP12931 536 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 DGKAP23743 735 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 OR1E1P30953 314 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 PSMD8P48556 350 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 HCAR3P49019 387 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 ARSEP51690 589 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 GNA12Q03113 381 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 ERMARDQ5T6L9 678 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 AFMIDQ63HM1 303 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 TXNRD3NBQ6F5E7 133 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 UMODL1-AS1Q8N2C9 162 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 OR7D4Q8NG98 312 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 NAF1Q96HR8 494 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 RPL10LQ96L21 214 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 C2orf49Q9BVC5 232 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 EVA1BQ9NVM1 165 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 NLGN3Q9NZ94 848 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 MYO1AQ9UBC5 1043 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 VPS28Q9UK41 221 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 AP4E1Q9UPM8 1137 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 SPTA1P02549 2419 aa13.89□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3DA0A087WVF3 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3IA0A087WXS9 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3EA0A087X179 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3KA0A087X1G2 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3FA6NER0 549 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3LB9A6J9 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TERTO14746 1132 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 SMAD6O43541 496 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 SDC3O75056 442 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 CSO75390 466 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TPM1P09493 284 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 H2AFZP0C0S5 128 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3HP0C7X1 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 VAV1P15498 845 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 IL4RP24394 825 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 CDC25BP30305 580 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 CLCN6P51797 869 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 DPYSQ14117 519 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 STAT4Q14765 748 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 SETMARQ53H47 684 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3GQ6DHY5 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3CQ6IPX1 549 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 H2AFVQ71UI9 128 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 LURAP1LQ8IV03 231 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TBC1D3Q8IZP1 549 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 ZNF564Q8TBZ8 553 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 TEKT4Q8WW24 435 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 BTBD6Q96KE9 485 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 PANX2Q96RD6 677 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 KCTD15Q96SI1 283 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 EPAS1Q99814 870 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 MAGEH1Q9H213 219 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 LRRC19Q9H756 370 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 PREBQ9HCU5 417 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 SPTLC3Q9NUV7 552 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 KLHL11Q9NVR0 708 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 IP6K2Q9UHH9 426 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 ANAPC7Q9UJX3 599 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 INTUQ9ULD6 942 aa13.88□□□□□ -0.19
SCAMP4-206ENST00000460767 HECTD1Q9ULT8 2610 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 LY6G6EA0A0G2JKS1 128 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 CDRT15L2A8MXV6 281 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 ALOX15BO15296 676 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 PIAS2O75928 621 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 RNF8O76064 485 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 ALPPL2P10696 532 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 MAN1A1P33908 653 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 ACVRL1P37023 503 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 DUSP3P51452 185 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 HADHBP55084 474 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 YBEYP58557 167 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 SLC20A2Q08357 652 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 ISXQ2M1V0 245 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 BOLA3Q53S33 107 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 AGBL4Q5VU57 503 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 SCYL2Q6P3W7 929 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 CLEC14AQ86T13 490 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 CPNE8Q86YQ8 564 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 TMEM139Q8IV31 216 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 STK40Q8N2I9 435 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 FAM174AQ8TBP5 190 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 CCDC42Q96M95 316 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 SLC46A1Q96NT5 459 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 DUSP23Q9BVJ7 150 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 MUC3BQ9H195 1237 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms