RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CST6Q15828 149 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 USP39Q53GS9 565 aaKnown RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 NAPEPLDQ6IQ20 393 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 FBXL19Q6PCT2 694 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 PPP1R21Q6ZMI0 780 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 C1orf210Q8IVY1 113 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 TP53INP2Q8IXH6 220 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 ZNF567Q8N184 647 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 STK40Q8N2I9 435 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 EZH1Q92800 747 aaPredicted RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 ACOX2Q99424 681 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 FAM118BQ9BPY3 351 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 HERPUD2Q9BSE4 406 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 COL25A1Q9BXS0 654 aaPredicted RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 SUV39H2Q9H5I1 410 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 LRRC40Q9H9A6 602 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 ZDHHC4Q9NPG8 344 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 KCTD5Q9NXV2 234 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 LHX3Q9UBR4 397 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 EBF1Q9UH73 591 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 ASIC3Q9UHC3 531 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 EVLQ9UI08 416 aaPredicted RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 PPM1HQ9ULR3 514 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 FZD4Q9ULV1 537 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 A0A1W2PQF6 199 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NEMP1O14524 444 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 ADAM23O75077 832 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 LEFTY1O75610 366 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 HLA-DQB2P05538 268 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 VAV1P15498 845 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NFKB1P19838 968 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CR2P20023 1033 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 HLA-DPA1P20036 260 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 ITGB7P26010 798 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 AVPR2P30518 371 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 SLC8A1P32418 973 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CNR2P34972 360 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CD86P42081 329 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NUMBP49757 651 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NEK3P51956 506 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 PDE1BQ01064 536 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 ZBTB17Q13105 803 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CALCOCO2Q13137 446 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 FZD5Q13467 585 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 ARMC3Q5W041 872 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CWF19L1Q69YN2 538 aaKnown RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 C8orf74Q6P047 294 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NCEH1Q6PIU2 408 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 KIAA1324Q6UXG2 1013 aaKnown RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 SLC36A4Q6YBV0 504 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 Q6ZS52 159 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CEP128Q6ZU80 1094 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 USP45Q70EL2 814 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 DTWD2Q8NBA8 298 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NETO2Q8NC67 525 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 PIP4K2CQ8TBX8 421 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 CCDC110Q8TBZ0 833 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 PDCD6IPQ8WUM4 868 aaKnown RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 EXOC2Q96KP1 924 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 KRT12Q99456 494 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 HDAC8Q9BY41 377 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 DDX47Q9H0S4 455 aaKnown RBP11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 NOD2Q9HC29 1040 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 RAB6BQ9NRW1 208 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 HACD3Q9P035 362 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 PHTF1Q9UMS5 762 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 RAI2Q9Y5P3 530 aa11.13□□□□□ -0.63
SMNDC1-203ENST00000460483 LRRC72A6NJI9 287 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 ZNF821O75541 412 aaPredicted RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 RNASEH2AO75792 299 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 UGT2B4P06133 528 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 NUDT1P36639 197 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 KCNJ1P48048 391 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 GRIA4P48058 902 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 PSMD8P48556 350 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 MAXP61244 160 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 RPS14P62263 151 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 CAV1Q03135 178 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 CDK18Q07002 472 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 GPS1Q13098 491 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 ATXN7L2Q5T6C5 722 aaPredicted RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 NEK5Q6P3R8 708 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 ERN2Q76MJ5 926 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 SFTPA1Q8IWL2 248 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 RAVER1Q8IY67 606 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 CNTD1Q8N815 330 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 ZNF366Q8N895 744 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms