RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PIM3Q86V86 326 aa18.31■□□□□ 0.52
HPS3-202ENST00000460120 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
HPS3-202ENST00000460120 NSMCE4AQ9NXX6 385 aa18.31■□□□□ 0.52
HPS3-202ENST00000460120 MID2Q9UJV3 735 aa18.31■□□□□ 0.52
HPS3-202ENST00000460120 AK5Q9Y6K8 562 aa18.31■□□□□ 0.52
HPS3-202ENST00000460120 M0QZQ0 153 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 FGF10O15520 208 aaPredicted RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 XRCC1P18887 633 aaPredicted RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 CCND3P30281 292 aaPredicted RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 FLT3LGP49771 235 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 IHHQ14623 411 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 RTKNQ9BST9 563 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 MRPL46Q9H2W6 279 aaKnown RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 SP110Q9HB58 689 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 ENTPD7Q9NQZ7 604 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 RNASEH1O60930 286 aaKnown RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 H2AFYO75367 372 aaKnown RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 CYP11A1P05108 521 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 THRAP10827 490 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 ELNP15502 786 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 PAMP19021 973 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 PPARGP37231 505 aaPredicted RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 PPP1R3AQ16821 1122 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 MANEALQ5VSG8 457 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 ACTL7AQ9Y615 435 aa18.3■□□□□ 0.52
HPS3-202ENST00000460120 COPG1Q9Y678 874 aaKnown RBP18.3■□□□□ 0.52
HPS3-202ENST00000460120 ATP6AP2A0A1C7CYW4 349 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 RGSL1A5PLK6 1076 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 CACNG3O60359 315 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 ATP6AP2O75787 350 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 CYBAP13498 195 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 ARSDP51689 593 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 MTTPP55157 894 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 FRG1Q14331 258 aaKnown RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 POTEHQ6S545 545 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 RANBP10Q6VN20 620 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 PCDH20Q8N6Y1 951 aaKnown RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 KYQ8NBH2 561 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 ANKRD49Q8WVL7 239 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 SUSD3Q96L08 255 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 UBE2OQ9C0C9 1292 aaKnown RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 DSEQ9UL01 958 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 TARM1B6A8C7 271 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 LYNP07948 512 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 TBX4P57082 545 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 ART3Q13508 389 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 EIF4EBP2Q13542 120 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 NAIF1Q69YI7 327 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 C2CD4AQ8NCU7 369 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 RNF217Q8TC41 542 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 TREX1Q9NSU2 369 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 MAGEA13PA6NCF6 341 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 AP3B1O00203 1094 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 CRABP2P29373 138 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 DPP6P42658 865 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 ZNF135P52742 658 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 MLLT6P55198 1093 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 MAPRE1Q15691 268 aaKnown RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 ARTNQ5T4W7 220 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 MARC1Q5VT66 337 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 MFSD14CQ5VZR4 134 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 CLEC6AQ6EIG7 209 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 OR52E8Q6IFG1 317 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 TIGD7Q6NT04 549 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 LAYNQ6UX15 382 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 GATA6Q92908 595 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 HDAC10Q969S8 669 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 GCNAQ96QF7 691 aa18.29■□□□□ 0.52
HPS3-202ENST00000460120 MARCH4Q9P2E8 410 aaPredicted RBP18.29■□□□□ 0.52
HPS3-202ENST00000460120 CAPN8A6NHC0 703 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 CYP2C18P33260 490 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 HADHAP40939 763 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 NME5P56597 212 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 FLOT2Q14254 428 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 FBXO48Q5FWF7 155 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 BNC2Q6ZN30 1099 aaPredicted RBP18.28■□□□□ 0.52
HPS3-202ENST00000460120 KDM1BQ8NB78 822 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 RDH11Q8TC12 318 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 BLOC1S5Q8TDH9 187 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 SERPINB11Q96P15 392 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 KLHL4Q9C0H6 718 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 ALG9Q9H6U8 611 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 ZFYVE28Q9HCC9 887 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 IGSF5Q9NSI5 407 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 HCSTQ9UBK5 93 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 UXTQ9UBK9 157 aaPredicted RBP18.28■□□□□ 0.52
HPS3-202ENST00000460120 MANSC4A6NHS7 340 aaPredicted RBP18.28■□□□□ 0.52
HPS3-202ENST00000460120 KCNU1A8MYU2 1149 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 PBX3P40426 434 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 SERPINH1P50454 418 aaKnown RBP18.28■□□□□ 0.52
HPS3-202ENST00000460120 CSRP3P50461 194 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 MSLNQ13421 630 aaPredicted RBP18.28■□□□□ 0.52
HPS3-202ENST00000460120 MS4A13Q5J8X5 152 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 GPR158Q5T848 1215 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 FOXB2Q5VYV0 432 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 CFAP52Q8N1V2 620 aa18.28■□□□□ 0.52
HPS3-202ENST00000460120 LZTR1Q8N653 840 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms