RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CHN2P52757 468 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MLLT6P55198 1093 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 WNT3AP56704 352 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 SEPT6Q14141 434 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ADGRE1Q14246 886 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 DSC3Q14574 896 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 POU6F1Q14863 301 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 RBBP5Q15291 538 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TAF1CQ15572 869 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 DLG2Q15700 870 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 GRAMD1BQ3KR37 738 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TECRLQ5HYJ1 363 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 RALGPS1Q5JS13 557 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 GNASQ5JWF2 1037 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PRAMEF19Q5SWL8 479 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TSTD2Q5T7W7 516 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 VWA5B1Q5TIE3 1220 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 NXNQ6DKJ4 435 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 DENND5AQ6IQ26 1287 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MRNIPQ6NTE8 343 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 GLB1LQ6UWU2 654 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TRIM67Q6ZTA4 783 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 CHSY3Q70JA7 882 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 SLC41A1Q8IVJ1 513 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 KBTBD2Q8IY47 623 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ALDH16A1Q8IZ83 802 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TMEM151AQ8N4L1 468 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MARVELD2Q8N4S9 558 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PCYOX1LQ8NBM8 494 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 UCMAQ8WVF2 138 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PYDC1Q8WXC3 89 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ROPN1LQ96C74 230 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ASB9Q96DX5 294 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 L3HYPDHQ96EM0 354 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 DTNBP1Q96EV8 351 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 CELF6Q96J87 481 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 BTN2A3PQ96KV6 586 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 CEP295NLQ96MC4 621 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF599Q96NL3 588 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 GPR78Q96P69 363 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 OR52B2Q96RD2 323 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 CYP2S1Q96SQ9 504 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 APOL2Q9BQE5 337 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 RTP3Q9BQQ7 232 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TRIM4Q9C037 500 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 SLC39A8Q9C0K1 460 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 YIPF3Q9GZM5 350 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 SIK2Q9H0K1 926 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 UNC93B1Q9H1C4 597 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MUC13Q9H3R2 512 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MEAF6Q9HAF1 191 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 SP110Q9HB58 689 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ZFYVE28Q9HCC9 887 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ATP13A1Q9HD20 1204 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PAPOLBQ9NRJ5 636 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF358Q9NW07 568 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TMEM45AQ9NWC5 275 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TMEM248Q9NWD8 314 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 CPA4Q9UI42 421 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 COMMD3-BMI1R4GMX3 469 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PATJQ8NI35 1801 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-202ENST00000459727 MOXD2PA6NHM9 499 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 SYN3O14994 580 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 GPC4O75487 556 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TNFAIP8O95379 198 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 EOMESO95936 686 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 HLA-DQB2P05538 268 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 CHRNGP07510 517 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PABPC4LP0CB38 370 aaKnown RBP8.91□□□□□ -0.98
HDAC3-202ENST00000459727 COL6A1P12109 1028 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TPH1P17752 444 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 ALDH1A3P47895 512 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TAS2R39P59534 338 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PRAMEP78395 509 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 BEX3Q00994 111 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 RING1Q06587 406 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 IL10RBQ08334 325 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 MAP7Q14244 749 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PTK2BQ14289 1009 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 CNGA3Q16281 694 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF423Q2M1K9 1284 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 MAP7D1Q3KQU3 841 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 FAM26DQ5JW98 314 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 SAMD4BQ5PRF9 694 aaKnown RBP8.91□□□□□ -0.98
HDAC3-202ENST00000459727 ESRP1Q6NXG1 681 aaKnown RBP8.91□□□□□ -0.98
HDAC3-202ENST00000459727 KDELC1Q6UW63 502 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 OTOP3Q7RTS5 596 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 HPS6Q86YV9 775 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TP53INP2Q8IXH6 220 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 NUP93Q8N1F7 819 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PELI3Q8N2H9 469 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 CHCHD4Q8N4Q1 142 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 SLC25A41Q8N5S1 370 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TEX26Q8N6G2 289 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 CCNYL1Q8N7R7 359 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 KDM1BQ8NB78 822 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 GPR150Q8NGU9 434 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 DDI1Q8WTU0 396 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TSPEARQ8WU66 669 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms