RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 ACOD1A6NK06 481 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 NPIPB5A8MRT5 1133 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 SERPINE3A8MV23 424 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 NPIPB4C9JG80 1138 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 RAB27BO00194 218 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 BTN3A1O00481 513 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 TBX3O15119 743 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 RNMTO43148 476 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 B4GALT2O60909 372 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 WDR1O75083 606 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 NDUFS7O75251 213 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 RFPL2O75678 378 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 INMTO95050 263 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 EML2O95834 649 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ALDOCP09972 364 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 SELLP14151 372 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 C5AR1P21730 350 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PBX1P40424 430 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ZFP36L2P47974 494 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 COPAP53621 1224 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 HERV-K104P61576 105 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ARHGAP8P85298 464 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 TMPRSS15P98073 1019 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 STRN3Q13033 797 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 SLC13A2Q13183 592 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PLS1Q14651 629 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ACOX1Q15067 660 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PUM3Q15397 648 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 C3AR1Q16581 482 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 WSCD2Q2TBF2 565 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 P3H1Q32P28 736 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 KIAA1644Q3SXP7 199 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 KRTCAP3Q53RY4 240 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ARL13AQ5H913 290 aaPredicted RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 KCNT1Q5JUK3 1230 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 TRNP1Q6NT89 227 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ZNF530Q6P9A1 599 aaPredicted RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PGM2L1Q6PCE3 622 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 KRT28Q7Z3Y7 464 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 KRT27Q7Z3Y8 459 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ODF3L1Q8IXM7 274 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 RBFAQ8N0V3 343 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 LSMEM2Q8N112 164 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 SCML4Q8N228 414 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 CD177Q8N6Q3 437 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 SUMF1Q8NBK3 374 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 TBC1D22AQ8WUA7 517 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 OVCA2Q8WZ82 227 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 MRRFQ96E11 262 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 NEUROD6Q96NK8 337 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 TRAPPC9Q96Q05 1148 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PSMB7Q99436 277 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 SLC13A1Q9BZW2 595 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 LHPPQ9H008 270 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 VTA1Q9NP79 307 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 MKS1Q9NXB0 559 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 OR6C3Q9NZP0 311 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 HERC5Q9UII4 1024 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 FBXO4Q9UKT5 387 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 KCNJ14Q9UNX9 436 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 MAPRE3Q9UPY8 281 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PCDHB7Q9Y5E2 793 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 MRFAP1Q9Y605 127 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 PSAT1Q9Y617 370 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 TDRD15B5MCY1 1934 aaKnown RBP0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 MUC5ACP98088 5654 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 COL15A1P39059 1388 aa0.06□□□□□ -2.4
SNORD42B-201ENST00000458893 ABCA7Q8IZY2 2146 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 ARHGAP10A1A4S6 786 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 TRIM49BA6NDI0 452 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CAPN8A6NHC0 703 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 AKR1B15C9JRZ8 316 aaPredicted RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 TNPO2O14787 897 aaKnown RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 XPOTO43592 962 aaKnown RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CCNT1O60563 726 aaKnown RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CCNT2O60583 730 aaKnown RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CLDN7O95471 211 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 DUS4LO95620 317 aaKnown RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 HPP00738 406 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 HLA-DQA2P01906 255 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 IGKV4-1P06312 121 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 MMP2P08253 660 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 FAM157CP0CG43 387 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 HARSP12081 509 aaKnown RBP0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 HLA-DOBP13765 273 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CD99P14209 185 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 ATP2B1P20020 1258 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CHATP28329 748 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 CLCNKBP51801 687 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 SHC2P98077 582 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 PAX8Q06710 450 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 MTAPQ13126 283 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 SGSM1Q2NKQ1 1148 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 GTDC1Q4AE62 458 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 EIPR1Q53HC9 387 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 TECRLQ5HYJ1 363 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 STXBP5Q5T5C0 1151 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 WLSQ5T9L3 541 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 FAM171A1Q5VUB5 890 aa0.05□□□□□ -2.4
SNORD42B-201ENST00000458893 KRT39Q6A163 491 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms