RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SPANXN3Q5MJ09 141 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 SYCP2LQ5T4T6 812 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 LGSNQ5TDP6 509 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 RNF219Q5W0B1 726 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 STEAP4Q687X5 459 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 RETSATQ6NUM9 610 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 CAPN12Q6ZSI9 719 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 CYS1Q717R9 158 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 ZNF534Q76KX8 674 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 GRASPQ7Z6J2 395 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 KIAA2013Q8IYS2 634 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 CNTD1Q8N815 330 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 SUMF1Q8NBK3 374 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 TTC16Q8NEE8 873 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 PPHLN1Q8NEY8 458 aaKnown RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 FLCNQ8NFG4 579 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 IPMKQ8NFU5 416 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 ZSCAN18Q8TBC5 510 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 FBF1Q8TES7 1133 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 IMP4Q96G21 291 aaKnown RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 SIGLEC10Q96LC7 697 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 ACE2Q9BYF1 805 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 PDFQ9HBH1 243 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 VPS28Q9UK41 221 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 CACNA1IQ9P0X4 2223 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 MYOFQ9NZM1 2061 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 IQANK1A0A1B0GTG1 560 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 FAM237BA0A1B0GVD1 139 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 F5H423 210 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 POC1B-GALNT4F8VUJ3 575 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 J3KR12 359 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 CBX4O00257 560 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 GFRA2O00451 464 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 GREM1O60565 184 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 BANF1O75531 89 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 PEX11BO96011 259 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 GJA1P17302 382 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 PAMP19021 973 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 HLA-DPA1P20036 260 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 CNTFP26441 200 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 MGAT1P26572 445 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 HOXD9P28356 352 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 SSTR1P30872 391 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 ACVRL1P37023 503 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 CCR2P41597 374 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 MAPK8P45983 427 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 SLCO1A2P46721 670 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 SERPINB9P50453 376 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 GPX6P59796 221 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 PPP2R2AP63151 447 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 CBX1P83916 185 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 ILF2Q12905 390 aaKnown RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 DMC1Q14565 340 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 TMED2Q15363 201 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 INO80DQ53TQ3 878 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 ATAT1Q5SQI0 421 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 HP1BP3Q5SSJ5 553 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 ALG1LQ6GMV1 187 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 CXorf57Q6NSI4 855 aaKnown RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 KDM7AQ6ZMT4 941 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 OTOP3Q7RTS5 596 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 GPR149Q86SP6 731 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 BBS7Q8IWZ6 715 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 CELF5Q8N6W0 485 aaKnown RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 OR7D4Q8NG98 312 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 OR52K1Q8NGK4 314 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 FIBINQ8TAL6 211 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 USP13Q92995 863 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 TTC17Q96AE7 1141 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 ACDQ96AP0 544 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 ARL8AQ96BM9 186 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 ZNF707Q96C28 371 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 TLCD1Q96CP7 247 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 TCEAL4Q96EI5 215 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 IFT43Q96FT9 208 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 FEM1CQ96JP0 617 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 PSKH2Q96QS6 385 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 XPO6Q96QU8 1125 aaKnown RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 MGME1Q9BQP7 344 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 MLPHQ9BV36 600 aaPredicted RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 FICDQ9BVA6 458 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 KCNK12Q9HB15 430 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 MRM3Q9HC36 420 aaKnown RBP9.05□□□□□ -0.96
VPS50-207ENST00000458530 NSMCE4AQ9NXX6 385 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 TXNDC16Q9P2K2 825 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 R4GN57 208 aa9.05□□□□□ -0.96
VPS50-207ENST00000458530 TCRBV9S1A1TA0A576 114 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 HEATR9A2RTY3 570 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 AVILO75366 819 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 MOSPD3O75425 235 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 PMPCBO75439 489 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 KRT38O76015 456 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 USP1O94782 785 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms