RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 NRP1O14786 923 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 CYP3A5P20815 502 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 ADRM1Q16186 407 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 TIGD5Q53EQ6 642 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 PHTF2Q8N3S3 785 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 GAS2L1Q99501 681 aaPredicted RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 TCF25Q9BQ70 676 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 PAIP1Q9H074 479 aaKnown RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 MYRFQ9Y2G1 1151 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 E5RI56 91 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 RAMP2O60895 175 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 RNASEH1O60930 286 aaKnown RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 GALK1P51570 392 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 SMAD3P84022 425 aaKnown RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 TBCELQ5QJ74 424 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 FRMD7Q6ZUT3 714 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 DSELQ8IZU8 1212 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 CLEC4FQ8N1N0 589 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 NDRG1Q92597 394 aaKnown RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 NCLNQ969V3 563 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 GPR63Q9BZJ6 419 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 ATP6AP2A0A1C7CYW4 349 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 BCLAF3A2AJT9 711 aaKnown RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 MYBPHLA2RUH7 354 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 MRASO14807 208 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 ATP6AP2O75787 350 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.231e-16■■■■□ 21.6
LSS-205ENST00000457828 OCA2Q04671 838 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 TAF10Q12962 218 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 B3GNT9Q6UX72 402 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 SMG7Q92540 1137 aaKnown RBP16.48■□□□□ 0.23
LSS-205ENST00000457828 TUBGCP3Q96CW5 907 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 VPS50Q96JG6 964 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
LSS-205ENST00000457828 SCN9AQ15858 1988 aa16.48■□□□□ 0.23
LSS-205ENST00000457828 TKTP29401 623 aaKnown RBP16.47■□□□□ 0.23
LSS-205ENST00000457828 C16orf59Q7L2K0 433 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 WDTC1Q8N5D0 677 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 BAG5Q9UL15 447 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 SLC30A1Q9Y6M5 507 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 OR6B1O95007 311 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 TSPAN8P19075 237 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 C15orf39Q6ZRI6 1047 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 CACUL1Q86Y37 369 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 FICDQ9BVA6 458 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 ATP13A1Q9HD20 1204 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 NDFIP2Q9NV92 336 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 ZNF839A8K0R7 811 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 ZNF189O75820 626 aaPredicted RBP16.47■□□□□ 0.23
LSS-205ENST00000457828 RHOAP61586 193 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 CERCAMQ5T4B2 595 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 ZNF470Q6ECI4 717 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 SLC41A1Q8IVJ1 513 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 PEBP4Q96S96 227 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 GJD2Q9UKL4 321 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 KLF11O14901 512 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 PYGLP06737 847 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 LMO2P25791 158 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 PTPN7P35236 360 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 GMPRP36959 345 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 GPD2P43304 727 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 NR1H2P55055 460 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 ANKLE1Q8NAG6 615 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 MFSD3Q96ES6 412 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 RTKNQ9BST9 563 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
LSS-205ENST00000457828 XPR1Q9UBH6 696 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 DNMT3LQ9UJW3 386 aa16.47■□□□□ 0.23
LSS-205ENST00000457828 SYCE1LA8MT33 242 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 RFPL1O75677 317 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 PSMA4P25789 261 aaKnown RBP16.46■□□□□ 0.23
LSS-205ENST00000457828 PSME3P61289 254 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 FOXD4Q12950 439 aaPredicted RBP16.46■□□□□ 0.23
LSS-205ENST00000457828 RETSATQ6NUM9 610 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 SLC39A5Q6ZMH5 540 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 MYO1HQ8N1T3 1032 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 RAP2CQ9Y3L5 183 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 SNX5Q9Y5X3 404 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 MYO7AQ13402 2215 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 TK2O00142 265 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 MFSD11O43934 449 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 ZNF23P17027 643 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 SCNN1BP51168 640 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 CTBP1Q13363 440 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 RAB6CQ53S08 254 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 INTS6LQ5JSJ4 861 aaKnown RBP16.46■□□□□ 0.23
LSS-205ENST00000457828 C6orf10Q5SRN2 563 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 AGAP9Q5VTM2 703 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 TMEM198Q66K66 360 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 RP9Q8TA86 221 aaKnown RBP16.46■□□□□ 0.23
LSS-205ENST00000457828 ERLEC1Q96DZ1 483 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 RAB6CQ9H0N0 254 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 CROTQ9UKG9 612 aa16.46■□□□□ 0.23
LSS-205ENST00000457828 DDX60Q8IY21 1712 aaKnown RBP16.46■□□□□ 0.23
LSS-205ENST00000457828 HACD1B0YJ81 288 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms