RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 OSCP1Q8WVF1 389 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SDCCAG3Q96C92 435 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NXNL1Q96CM4 212 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 MFSD3Q96ES6 412 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRBF2Q96F24 287 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 DUS3LQ96G46 650 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAELQ96JY0 434 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF597Q96LX8 424 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZMAT2Q96NC0 199 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 BIRC8Q96P09 236 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 RANBP9Q96S59 729 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 OSMRQ99650 979 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NPAS2Q99743 824 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PKP2Q99959 881 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOPXQ9BPY8 73 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 APOL2Q9BQE5 337 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 C16orf70Q9BSU1 422 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 C9orf16Q9BUW7 83 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 COLEC11Q9BWP8 271 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 C1QTNF1Q9BXJ1 281 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 FTHL17Q9BXU8 183 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 EIF2AQ9BY44 585 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 YTHDF1Q9BYJ9 559 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TKTL2Q9H0I9 626 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 AP5M1Q9H0R1 490 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 OSBPL2Q9H1P3 480 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADAMTS10Q9H324 1103 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ABHD16BQ9H3Z7 469 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NXF3Q9H4D5 531 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF385DQ9H6B1 395 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CAAP1Q9H8G2 361 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLK4Q9HAZ1 481 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PLGRKTQ9HBL7 147 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PDGFCQ9NRA1 345 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 VPS45Q9NRW7 570 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TBC1D23Q9NUY8 699 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHCHD3Q9NX63 227 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PKD2L2Q9NZM6 624 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLK14Q9P0G3 267 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 RBPJLQ9UBG7 517 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 OR12D3Q9UGF7 316 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SUN2Q9UH99 717 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZDHHC2Q9UIJ5 367 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTBP2Q9UKA9 531 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 APPL1Q9UKG1 709 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 FBXO5Q9UKT4 447 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNOT6Q9ULM6 557 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC8A2Q9UPR5 921 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PHF24Q9UPV7 400 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC45A1Q9Y2W3 748 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 FIS1Q9Y3D6 152 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNX13Q9Y5W8 968 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 MCM3APO60318 1980 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PLXNB2O15031 1838 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 BRCA1P38398 1863 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF103-CHMP3A0A140T963 221 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TCRBV3S1A0A5B6 114 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 DHRS12A0PJE2 317 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCDC78A2IDD5 438 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 C17orf102A2RUQ5 167 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF839A8K0R7 811 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SYCE1LA8MT33 242 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 A8MT66 165 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCNU1A8MYU2 1149 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADM5C9JUS6 153 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 E7ENX8 843 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GOLGA8TH3BQL2 631 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF701M0R085 212 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 NR5A2O00482 541 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLDN5O00501 218 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACOT8O14734 319 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GABRDO14764 452 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 AZIN1O14977 448 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC7A4O43246 635 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADCY6O43306 1168 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNAP91O60641 907 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PEX10O60683 326 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GPR32O75388 356 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNASEH2AO75792 299 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GABBR2O75899 941 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SORBS2O94875 1100 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRIG2O94898 1065 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ESRRBO95718 433 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PGK1P00558 417 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 AHSGP02765 367 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 AMHP03971 560 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PYGLP06737 847 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GPIP06744 558 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 THP07101 528 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP17L7P0C7H9 530 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 UMPSP11172 480 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 BMP2P12643 396 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IDO1P14902 403 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOXB6P17509 224 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LBPP18428 481 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IMPDH1P20839 514 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 FASP25445 335 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 HMOX2P30519 316 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOXA11P31270 313 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARRB2P32121 409 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms