RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 IHHQ14623 411 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 POLD3Q15054 466 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-202ENST00000457422 RCN1Q15293 331 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 SLC9B1Q4ZJI4 515 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 FSCBQ5H9T9 825 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 RTP2Q5QGT7 225 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 MAPK15Q8TD08 544 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 PDCD6IPQ8WUM4 868 aaKnown RBP16.83■□□□□ 0.28
CCDC43-202ENST00000457422 ELMO2Q96JJ3 720 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 RPRD1AQ96P16 312 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-202ENST00000457422 THTPAQ9BU02 230 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 MRPL46Q9H2W6 279 aaKnown RBP16.83■□□□□ 0.28
CCDC43-202ENST00000457422 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
CCDC43-202ENST00000457422 STX18Q9P2W9 335 aaKnown RBP16.83■□□□□ 0.28
CCDC43-202ENST00000457422 LOC285095A0A1B0GVY8 99 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 MROH6A6NGR9 719 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 DLX3O60479 287 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 KRT36O76013 467 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CHRNGP07510 517 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 GLDCP23378 1020 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 MPSTP25325 297 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 ELF1P32519 619 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CLCN5P51795 746 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 TCTN1Q2MV58 587 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 C6orf163Q5TEZ5 329 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 GPATCH11Q8N954 259 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 OR13J1Q8NGT2 312 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 STMN2Q93045 179 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 NXNL1Q96CM4 212 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 MOCOSQ96EN8 888 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 MYEOVQ96EZ4 313 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CAPNS2Q96L46 248 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 MRPL57Q9BQC6 102 aaKnown RBP16.82■□□□□ 0.28
CCDC43-202ENST00000457422 TMEM175Q9BSA9 504 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CCSER2Q9H7U1 834 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 HMX1Q9NP08 348 aaPredicted RBP16.82■□□□□ 0.28
CCDC43-202ENST00000457422 SLC7A8Q9UHI5 535 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 SLCO1B7G3V0H7 640 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 AURKAO14965 403 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 HDAC3O15379 428 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 SLC7A4O43246 635 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 TRPA1O75762 1119 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CIB2O75838 187 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 SNUPNO95149 360 aaKnown RBP16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CCR10P46092 362 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 ACTR3P61158 418 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 BFSP2Q13515 415 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 NAA25Q14CX7 972 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 SLC14A2Q15849 920 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 C5orf22Q49AR2 442 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 ARL13AQ5H913 290 aaPredicted RBP16.82■□□□□ 0.28
CCDC43-202ENST00000457422 NADSYN1Q6IA69 706 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
CCDC43-202ENST00000457422 CRIPAKQ8N1N5 446 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 PGBD5Q8N414 524 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 AGR3Q8TD06 166 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 GIPC2Q8TF65 315 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 OMDQ99983 421 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 TTLL2Q9BWV7 592 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 SEZ6LQ9BYH1 1024 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 LRFN2Q9ULH4 789 aa16.82■□□□□ 0.28
CCDC43-202ENST00000457422 HOXA2O43364 376 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 PIGNO95427 931 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 GNRH1P01148 92 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 ATXN1LP0C7T5 689 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 NCF2P19878 526 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 ETFBP38117 255 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 NAGLUP54802 743 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 SLC12A2P55011 1212 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 SLC34A1Q06495 639 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 DUSP4Q13115 394 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 BTG3Q14201 252 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 LBRQ14739 615 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 SEL1L3Q68CR1 1132 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CNSTQ6PJW8 725 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 ANKS3Q6ZW76 656 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TAS1R1Q7RTX1 841 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TMC7Q7Z402 723 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 LMNTD2Q8IXW0 634 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 POU5F2Q8N7G0 328 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 MAB21L3Q8N8X9 362 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CLPTM1LQ96KA5 538 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 UNKQ9C0B0 810 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 MFSD1Q9H3U5 465 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 RETREG1Q9H6L5 497 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 UXTQ9UBK9 157 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 VTI1BQ9UEU0 232 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 A0A088AWK7 358 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 ZBTB14O43829 449 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 NPHS1O60500 1241 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TLR5O60602 858 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 PRAMEF11O60813 436 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TACR2P21452 398 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 SERPINB5P36952 375 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 ACVRL1P37023 503 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms