RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 RGRP47804 291 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 GRIA4P48058 902 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 NR2C2P49116 596 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 COPS2P61201 443 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 PPP2CBP62714 309 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 RACK1P63244 317 aaKnown RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 PPP2CAP67775 309 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 IRX4P78413 519 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 CCZ1BP86790 482 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 CCZ1P86791 482 aaPredicted RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 PPIDQ08752 370 aaKnown RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 SLC10A2Q12908 348 aaPredicted RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 PPP2R5EQ16537 467 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 AASDHQ4L235 1098 aaPredicted RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 MARC1Q5VT66 337 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 ALG1LQ6GMV1 187 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 KIAA1161Q6NSJ0 714 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 BRAT1Q6PJG6 821 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 ZNF662Q6ZS27 426 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 BZW1Q7L1Q6 419 aaKnown RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 SRLQ86TD4 932 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 NT5DC3Q86UY8 548 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 RFX6Q8HWS3 928 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 ZCCHC9Q8N567 271 aaKnown RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 TEX26Q8N6G2 289 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 SPOCK2Q92563 424 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 KRT35Q92764 455 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 KLHL32Q96NJ5 620 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 OLFM3Q96PB7 478 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 EDEM2Q9BV94 578 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MIR1-1HGQ9H1L0 117 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 DMTF1Q9Y222 760 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 EFR3BQ9Y2G0 817 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 FADS3Q9Y5Q0 445 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 CABIN1Q9Y6J0 2220 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 A0A0U1RQJ8 604 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 A0A1W2PQ67 120 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 TRAFD1O14545 582 aaPredicted RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 PPP1R12AO14974 1030 aaPredicted RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 AREL1O15033 823 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 INSIG1O15503 277 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 TSPAN6O43657 245 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CST8O60676 142 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 RNGTTO60942 597 aaKnown RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 SOCS5O75159 536 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PCDH8O95206 1070 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PIGNO95427 931 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 SYPP08247 313 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CES1P23141 567 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PTPN7P35236 360 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CETN2P41208 172 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 ABL2P42684 1182 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PEX5P50542 639 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 SCNN1BP51168 640 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 AFF3P51826 1226 aaKnown RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 RWDD2BP57060 319 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 BCL2L1Q07817 233 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 ELP6Q0PNE2 266 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PDK1Q15118 436 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 TEAD4Q15561 434 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 TMEM259Q4ZIN3 620 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 SETMARQ53H47 684 aaPredicted RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 NAPEPLDQ6IQ20 393 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 BBS12Q6ZW61 710 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PEX26Q7Z412 305 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PRPF39Q86UA1 669 aaKnown RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 HORMAD1Q86X24 394 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CAMK1DQ8IU85 385 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CCDC50Q8IVM0 306 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CCDC13Q8IYE1 715 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PGBD5Q8N414 524 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CCNYQ8ND76 341 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 ANP32BQ92688 251 aaKnown RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 ECHDC3Q96DC8 303 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 PHF12Q96QT6 1004 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 ZDHHC5Q9C0B5 715 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 POLR1EQ9GZS1 481 aaKnown RBP8.59□□□□□ -1.03
SP140-207ENST00000456542 SUV39H2Q9H5I1 410 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 EBF2Q9HAK2 575 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 TM9SF3Q9HD45 589 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 TRIM10Q9UDY6 481 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 AMFRQ9UKV5 643 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 HEY1Q9Y5J3 304 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
SP140-207ENST00000456542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.58□□□□□ -1.04
SP140-207ENST00000456542 A0A1W2PQU0 124 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 UPK3BL1B0FP48 263 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 UPK3BL2E5RIL1 263 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 PRAMEF26H0Y7S4 382 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 APOC4-APOC2K7ER74 178 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 ARHGAP33O14559 1287 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 SLC30A4O14863 429 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 VILLO15195 856 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 SPINT1O43278 529 aa8.58□□□□□ -1.04
SP140-207ENST00000456542 HTRA2O43464 458 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms