RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TRIM59Q8IWR1 403 aa23.55■■□□□ 1.36
PTPRA-208ENST00000455631 DRC7Q8IY82 874 aa23.55■■□□□ 1.36
PTPRA-208ENST00000455631 ZNF397Q8NF99 534 aaPredicted RBP23.55■■□□□ 1.36
PTPRA-208ENST00000455631 EPAS1Q99814 870 aa23.55■■□□□ 1.36
PTPRA-208ENST00000455631 EDEM3Q9BZQ6 932 aa23.55■■□□□ 1.36
PTPRA-208ENST00000455631 GEMIN8Q9NWZ8 242 aaKnown RBP23.55■■□□□ 1.36
PTPRA-208ENST00000455631 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.55■■□□□ 1.36
PTPRA-208ENST00000455631 FOXJ2Q9P0K8 574 aa23.55■■□□□ 1.36
PTPRA-208ENST00000455631 ZDHHC9Q9Y397 364 aa23.55■■□□□ 1.36
PTPRA-208ENST00000455631 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.55■■□□□ 1.36
PTPRA-208ENST00000455631 MMP20O60882 483 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 CD44P16070 742 aaKnown RBP23.54■■□□□ 1.36
PTPRA-208ENST00000455631 SNX16P57768 344 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 ARHGAP44Q17R89 818 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 PTPN20Q4JDL3 420 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 TTI2Q6NXR4 508 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 RD3Q7Z3Z2 195 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 CCNJLQ8IV13 435 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 FMR1NBQ8N0W7 255 aaPredicted RBP23.54■■□□□ 1.36
PTPRA-208ENST00000455631 SPATA20Q8TB22 786 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 CXorf40AQ8TE69 158 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 TSACCQ96A04 125 aaPredicted RBP23.54■■□□□ 1.36
PTPRA-208ENST00000455631 C1orf74Q96LT6 269 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 FUCA2Q9BTY2 467 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 ZNF212Q9UDV6 495 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 PCDHGC3Q9UN70 934 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 LRP4O75096 1905 aa23.54■■□□□ 1.36
PTPRA-208ENST00000455631 CHD5Q8TDI0 1954 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 TOR1BO14657 336 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 AREL1O15033 823 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 CD160O95971 181 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 ETV5P41161 510 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 MAPK10P53779 464 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 UBAP2LQ14157 1087 aaKnown RBP23.53■■□□□ 1.36
PTPRA-208ENST00000455631 IRF4Q15306 451 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 ALG11Q2TAA5 492 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 ACBD5Q5T8D3 534 aaPredicted RBP23.53■■□□□ 1.36
PTPRA-208ENST00000455631 GKN2Q86XP6 184 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 Q8N9G6 341 aaPredicted RBP23.53■■□□□ 1.36
PTPRA-208ENST00000455631 TP53I13Q8NBR0 393 aaPredicted RBP23.53■■□□□ 1.36
PTPRA-208ENST00000455631 OR6C4Q8NGE1 309 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 USP7Q93009 1102 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 ISG20Q96AZ6 181 aaKnown RBP23.53■■□□□ 1.36
PTPRA-208ENST00000455631 KLHL32Q96NJ5 620 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 TBCBQ99426 244 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 ZYG11BQ9C0D3 744 aa23.53■■□□□ 1.36
PTPRA-208ENST00000455631 UNC13CQ8NB66 2214 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 RASGRP1O95267 797 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 F9P00740 461 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 POLD3Q15054 466 aaPredicted RBP23.52■■□□□ 1.36
PTPRA-208ENST00000455631 KLHL40Q2TBA0 621 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 TTC7BQ86TV6 843 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 PTRH1Q86Y79 214 aaKnown RBP23.52■■□□□ 1.36
PTPRA-208ENST00000455631 PLPP6Q8IY26 295 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 OR2AP1Q8NGE2 309 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 TMEM159Q96B96 161 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 PGAP3Q96FM1 320 aaPredicted RBP23.52■■□□□ 1.36
PTPRA-208ENST00000455631 CMKLR1Q99788 373 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 WRAP53Q9BUR4 548 aaKnown RBP23.52■■□□□ 1.36
PTPRA-208ENST00000455631 OSBPL1AQ9BXW6 950 aa23.52■■□□□ 1.36
PTPRA-208ENST00000455631 ACVRL1P37023 503 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 PPP1R2P41236 205 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 SNRPD1P62314 119 aaKnown RBP23.51■■□□□ 1.35
PTPRA-208ENST00000455631 MORC3Q14149 939 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 ARTNQ5T4W7 220 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 TRIM65Q6PJ69 517 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 ZDHHC17Q8IUH5 632 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 NELFBQ8WX92 580 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 CRACR2AQ9BSW2 395 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 CTNND2Q9UQB3 1225 aa23.51■■□□□ 1.35
PTPRA-208ENST00000455631 A0A1W2PQC6 194 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 C9orf172C9J069 976 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 GNA14O95837 355 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 GSRP00390 522 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 GP1BBP13224 206 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 HTR1BP28222 390 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 ZFP36L1Q07352 338 aaKnown RBP23.5■■□□□ 1.35
PTPRA-208ENST00000455631 ENPP7Q6UWV6 458 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 DTX1Q86Y01 620 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 ZNF564Q8TBZ8 553 aaPredicted RBP23.5■■□□□ 1.35
PTPRA-208ENST00000455631 JPH3Q8WXH2 748 aaPredicted RBP23.5■■□□□ 1.35
PTPRA-208ENST00000455631 ARHGEF2Q92974 986 aaKnown RBP23.5■■□□□ 1.35
PTPRA-208ENST00000455631 NT5C3BQ969T7 300 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 FAM81BQ96LP2 452 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 EPN3Q9H201 632 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 PLCB1Q9NQ66 1216 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 ATP6V1DQ9Y5K8 247 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 RNF215Q9Y6U7 377 aa23.5■■□□□ 1.35
PTPRA-208ENST00000455631 ZFC3H1O60293 1989 aaKnown RBP23.49■■□□□ 1.35
PTPRA-208ENST00000455631 BICDL2A1A5D9 508 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 POP4O95707 220 aaKnown RBP23.49■■□□□ 1.35
PTPRA-208ENST00000455631 ITIH2P19823 946 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 CD82P27701 267 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 KRT9P35527 623 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 ETFBP38117 255 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 PEX5P50542 639 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 GEMIN4P57678 1058 aaKnown RBP23.49■■□□□ 1.35
PTPRA-208ENST00000455631 APBA1Q02410 837 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 NFATC4Q14934 902 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 SKIDA1Q1XH10 827 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms