RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PROSER1Q86XN7 944 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 HID1Q8IV36 788 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 EID2Q8N6I1 236 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ATP6V0D2Q8N8Y2 350 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 C1orf131Q8NDD1 294 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 BAHD1Q8TBE0 780 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FRS2Q8WU20 508 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 KLK6Q92876 244 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 UTP4Q969X6 686 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ALG14Q96F25 216 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SERAC1Q96JX3 654 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 PPP1R13BQ96KQ4 1090 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 BTN2A3PQ96KV6 586 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 RPRD1AQ96P16 312 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CDC6Q99741 560 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FEM1AQ9BSK4 669 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CEP41Q9BYV8 373 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 PCED1AQ9H1Q7 454 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM204AQ9H8W3 233 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 POPDC2Q9HBU9 364 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SIX2Q9NPC8 291 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 DDIT4Q9NX09 232 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC12A6Q9UHW9 1150 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 RWDD2AQ9UIY3 292 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 DNAJC12Q9UKB3 198 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ADAM30Q9UKF2 790 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 VANGL2Q9ULK5 521 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 PCDHB10Q9UN67 800 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 RAXQ9Y2V3 346 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 UNC13CQ8NB66 2214 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ASPMQ8IZT6 3477 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM208BQ5VWN6 2430 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FRYQ5TBA9 3013 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 CELSR3Q9NYQ7 3312 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 LRRK1Q38SD2 2015 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 A0A0D9SEW6 157 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 A0A1B0GTQ1 180 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 A0A1W2PR77 199 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 LRRC72A6NJI9 287 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 I6L893 689 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 K7ERQ8 282 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 TLR4O00206 839 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 VILLO15195 856 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC31A1O15431 190 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SMAD6O43541 496 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 TNFSF14O43557 240 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PCDHGA12O60330 932 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SNAP91O60641 907 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SRGAP2O75044 1071 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SDC3O75056 442 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ADCY5O95622 1261 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 FGFR1OPO95684 399 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ITGAVP06756 1048 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 NME1P15531 152 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF18P17022 549 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 C5AR1P21730 350 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 GLDCP23378 1020 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 CD38P28907 300 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 CCR1P32246 355 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 DRD3P35462 400 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 KRT9P35527 623 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 NNMTP40261 264 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 MTIF2P46199 727 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PLK1P53350 603 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ADPRHP54922 357 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PPP2CBP62714 309 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PPP2CAP67775 309 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC6A3Q01959 620 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 CNTN1Q12860 1018 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF177Q13360 481 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 DLG2Q15700 870 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 TPD52L1Q16890 204 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 COL28A1Q2UY09 1125 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PTPN20Q4JDL3 420 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 RAB6CQ53S08 254 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ALFQ53S48 1182 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 EFHC1Q5JVL4 640 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 TMEM201Q5SNT2 666 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 TAF3Q5VWG9 929 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 DPY19L2P1Q6NXN4 242 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 Q6ZS46 218 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 C11orf57Q6ZUT1 292 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 BEND5Q7L4P6 421 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SPATS2Q86XZ4 545 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ARMC10Q8N2F6 343 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 OR2T34Q8NGX1 318 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 OR6P1Q8NGX9 317 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PIP4K2CQ8TBX8 421 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SAP25Q8TEE9 199 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SHC3Q92529 594 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM46AQ96IP4 442 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC2A13Q96QE2 648 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PSMB7Q99436 277 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 MYOCQ99972 504 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ACE2Q9BYF1 805 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 MAGEB5Q9BZ81 275 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms