RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZNF512BQ96KM6 892 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 PPP1R10Q96QC0 940 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CPXM1Q96SM3 734 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PHOX2BQ99453 314 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ITPAQ9BY32 194 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF518BQ9C0D4 1074 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SCPEP1Q9HB40 452 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC35C2Q9NQQ7 365 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SMYD2Q9NRG4 433 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMEM39AQ9NV64 488 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CLN6Q9NWW5 311 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SAGE1Q9NXZ1 904 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TAS2R7Q9NYW3 318 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SH3BP4Q9P0V3 963 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 COPZ2Q9P299 210 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UPB1Q9UBR1 384 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMEM59LQ9UK28 342 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDH7Q9ULB5 785 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UBQLN1Q9UMX0 589 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 NCKAP1Q9Y2A7 1128 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 VPS9D1Q9Y2B5 631 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MAN2B2Q9Y2E5 1009 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TBC1D30Q9Y2I9 924 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRELID3BQ9Y3B1 194 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NFS1Q9Y697 457 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TNRQ92752 1358 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SIGLEC1Q9BZZ2 1709 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMEM2Q9UHN6 1383 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 C6orf229H3BNL8 230 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 H3BSA7 217 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 M0R233 179 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PSMD9O00233 223 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DLGAP1O14490 977 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AP3D1O14617 1153 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AURKAO14965 403 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RIMBP2O15034 1052 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 INPPL1O15357 1258 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GRID2O43424 1007 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MED24O75448 989 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ATG7O95352 703 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SNRPB2P08579 225 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 UBL4AP11441 157 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KCNA6P17658 529 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MYL12AP19105 171 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HTR2AP28223 471 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HTR7P34969 479 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MAGEA3P43357 314 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PIK3CGP48736 1102 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FMO5P49326 533 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NEK3P51956 506 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HIRAP54198 1017 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ATP12AP54707 1039 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CTDSPL2Q05D32 466 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDH18Q13634 790 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DSC3Q14574 896 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KYAT1Q16773 422 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CYP51A1Q16850 503 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMEM44Q2T9K0 475 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF404Q494X3 552 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDNFQ49AH0 187 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 BRDTQ58F21 947 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 NKAPLQ5M9Q1 402 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TPRG1LQ5T0D9 272 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LRRC38Q5VT99 294 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RFWD3Q6PCD5 774 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMPRSS11AQ6ZMR5 421 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DPY19L3Q6ZPD9 716 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GLYCTKQ8IVS8 523 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GPALPP1Q8IXQ4 340 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DDIASQ8IXT1 998 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KBTBD2Q8IY47 623 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 IFNL2Q8IZJ0 200 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TAGAPQ8N103 731 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LZTR1Q8N653 840 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ESX1Q8N693 406 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SMG8Q8ND04 991 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 GSTCDQ8NEC7 633 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LPCAT1Q8NF37 534 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDC26Q8NHZ8 85 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ITFG1Q8TB96 612 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 XAGE3Q8WTP9 111 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CELF1Q92879 486 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 GLG1Q92896 1179 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RFKQ969G6 155 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZUFSPQ96AP4 578 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RNF145Q96MT1 663 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CCDC106Q9BWC9 280 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DGCR6LQ9BY27 220 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KRTAP3-3Q9BYR6 98 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KRTAP3-2Q9BYR7 98 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LRRC4Q9HBW1 653 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRDM8Q9NQV8 689 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ADPRHL2Q9NX46 363 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PPP1R14DQ9NXH3 145 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RDH8Q9NYR8 311 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MOCS1Q9NZB8 636 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF624Q9P2J8 865 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 POLG2Q9UHN1 485 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC13A4Q9UKG4 626 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRR12Q9ULL5 1215 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms