RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 PFN3P60673 137 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 DPYSQ14117 519 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 CCDC157Q569K6 752 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 PTAR1Q7Z6K3 402 aaPredicted RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 TMPRSS12Q86WS5 348 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 DCP2Q8IU60 420 aaKnown RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 DENND6BQ8NEG7 585 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 OR4C6Q8NH72 309 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 NSMCE3Q96MG7 304 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 MYO1AQ9UBC5 1043 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 UBA2Q9UBT2 640 aaPredicted RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 DKK4Q9UBT3 224 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 KLF15Q9UIH9 416 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 APC2O95996 2303 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 LY6G6EA0A0G2JKS1 128 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 TRABD2BA6NFA1 517 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 MMP20O60882 483 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 PIGNO95427 931 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 CSF2P04141 144 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 MYBL1P10243 752 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 DESP17661 470 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 PCK1P35558 622 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 IGFALSP35858 605 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 UBASH3AP57075 661 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 RAD51Q06609 339 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 EIF2B5Q13144 721 aaKnown RBP12.5□□□□□ -0.41
MSH5-209ENST00000450148 DPYSL2Q16555 572 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 TMEM52BQ4KMG9 183 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 ZNF542PQ5EBM4 170 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 TXNRD3NBQ6F5E7 133 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 TTC7BQ86TV6 843 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 TP53I13Q8NBR0 393 aaPredicted RBP12.5□□□□□ -0.41
MSH5-209ENST00000450148 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 ARHGEF26Q96DR7 871 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 SUV39H2Q9H5I1 410 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 CCDC86Q9H6F5 360 aaKnown RBP12.5□□□□□ -0.41
MSH5-209ENST00000450148 DONSONQ9NYP3 566 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 RALYQ9UKM9 306 aaKnown RBP12.5□□□□□ -0.41
MSH5-209ENST00000450148 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 NENFQ9UMX5 172 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 SCINQ9Y6U3 715 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 U3KQA8 63 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 RP1P56715 2156 aa12.5□□□□□ -0.41
MSH5-209ENST00000450148 URB1O60287 2271 aaKnown RBP12.5□□□□□ -0.41
MSH5-209ENST00000450148 A0A087X0T9 212 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 ARHGAP42A6NI28 874 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 FPGTO14772 594 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 MUSKO15146 869 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 PRPSAP2O60256 369 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 GYPCP04921 128 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 FAM228BP0C875 321 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 CDK4P11802 303 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 NME1P15531 152 aaKnown RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 RABIFP47224 123 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 CSNK1DP48730 415 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 ZBED6P86452 979 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 SGCGQ13326 291 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 ILKQ13418 452 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 ACAP1Q15027 740 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 PPP6R3Q5H9R7 873 aaPredicted RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 MRPL47Q9HD33 250 aaKnown RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 MBNL1Q9NR56 388 aaKnown RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 ETNK2Q9NVF9 386 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 BZW2Q9Y6E2 419 aaKnown RBP12.49□□□□□ -0.41
MSH5-209ENST00000450148 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
MSH5-209ENST00000450148 PKD1L2Q7Z442 2459 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 NEMP1O14524 444 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 SCAMP1O15126 338 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 FFAR2O15552 330 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 NEBLO76041 1014 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 TM7SF2O76062 418 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 PEX11BO96011 259 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 SERPING1P05155 500 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 CYP1A2P05177 515 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 RARAP10276 462 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 SUOXP51687 545 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 ZNF135P52742 658 aaPredicted RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 HNRNPKP61978 463 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■■□□ 16.3
MSH5-209ENST00000450148 INSM1Q01101 510 aaPredicted RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 SLC25A11Q02978 314 aaKnown RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 IL10RBQ08334 325 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 GRM3Q14832 879 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 UGP2Q16851 508 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 HES3Q5TGS1 186 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms